Qipengyuania profunda: SD421_07700
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Entry
SD421_07700 CDS
T10896
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
qpr Qipengyuania profunda
Pathway
qpr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD421_07700 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qpr03400
]
SD421_07700 (uvrB)
DNA repair and recombination proteins [BR:
qpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD421_07700 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SD421_07700 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
AAA_22
Microtub_bd
TrwB_AAD_bind
Kinesin
AAA_33
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WPL58294
LinkDB
All DBs
Position
complement(1416550..1418736)
Genome browser
AA seq
728 aa
AA seq
DB search
MSELIIRRGLDEPDTTGEFVPHKPARPEKSMGGKAFKLVSEYTPSGDQPTAIAELSSAAK
DGDQTQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEFKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMIFDIKKGEAVDQRELIRKLVALQYKRNDAAFARGNFRVRGDSLEIFPSHYED
MAWRISFFGDDIEEISEFDPLTGKKGASLDKVRVYANSHYVTPGPTMKQAAEAIKFELAE
RLKELHEEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PENALLFVDESHQTVPQIGAMSKGDHRRKITLAEHGFRLPSCIDNRPLRFNEWDAMRPQT
FAVSATPGTWEMEQTGGVFAEQVIRPTGLIDPPVGIRPVEDQVQDCIEECKKTAAKGYRT
LVTTLTKRMAEDLTEFMHEAGVKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVDGHVILYADRITGSMERAMAETD
RRREKQKAYNEEHGITPQTIRRQIADIVAHTASQDGVTVDTGDDERNNLVGHNLRAYIED
LEKRMRTAAADLEFEEAGRLRDEIRQLENDELGLGDSEKKAPRVGRSDAGRPGTRKTRYG
KTQRKFGK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactgatcattcgaagaggattggacgagccggacaccaccggcgagttcgtc
ccccacaagcctgcgcgccccgaaaaatcgatgggcggcaaggcgttcaagctggtcagc
gaatatactccatcgggcgaccagccgaccgcgatcgccgaattgagcagcgcggccaag
gacggcgaccagacgcaggtgctgctgggcgtgaccgggtcgggcaagaccttcaccatg
gccaaggtaatcgaggaattgcaacggccggcgctgatcctcgcgccgaacaagatcctc
gccgcgcagctctatggcgagttcaagagcttcttccccgagaacgcagtcgaatatttc
gtcagctattacgactattaccagcccgaagcctacgtcccgcgcagcgacacctatatc
gagaaggaaagcagcgtaaacgaggcgatcgaccggatgcgccattcggccacccgcgcg
ctgctcgaacgcgacgacgtgatcatcgtcgcctcggtttcgtgcctctacggtatcggt
tcggtcgaaacctattcggcgatgatcttcgacatcaagaaaggcgaagcggtcgaccag
cgcgagctgatccgcaagctcgtcgcactgcagtacaagcgcaatgacgccgccttcgcg
cgcggcaatttccgcgtccgcggcgacagcctggagatcttccccagccactatgaagac
atggcgtggcggatcagcttcttcggcgacgatatcgaggaaatcagcgaattcgatccg
cttaccggcaagaagggcgccagcctcgacaaggtgcgcgtctatgccaattcgcactat
gtgacgcccgggccgacgatgaagcaggccgcggaggcgatcaagttcgagctcgccgag
cggctcaaggaactgcacgaggaaggccgcttgctcgaagcgcagcggctcgagcagcgg
accaatttcgatctcgagatgatcgccgccaccggcagctgcgcggggatcgagaactac
agccgcttcctcaccggtcgcctgccgggcgaaccgccgccgacattgttcgagtacctg
cccgaaaacgcgctgctgttcgtcgatgaaagccaccagacggtgccgcagatcggggcg
atgtcgaagggcgaccaccgccgcaagatcacgctcgccgaacatggttttcgcctgccc
tcctgtatcgacaaccgcccgctgcggttcaacgaatgggacgcgatgcgcccgcagacc
ttcgcggtttcggccacgccgggcacgtgggagatggaacagaccggcggcgtcttcgcc
gaacaggtcatccgccccaccgggctgatcgacccgccggtcggcatccgcccggtcgag
gaccaggtccaggactgcatcgaggaatgcaagaagaccgccgccaagggctatcgcacg
ctggtcaccacgctgaccaagcggatggcggaggatctgaccgaattcatgcacgaggcg
ggcgtcaaggtccgctatatgcactctgatgtcgagacgctcgaacgcatcgagctgatc
cgcgacctgcggctgggcgtctatgacgtgctggtggggatcaacctgctgcgcgagggg
ctcgacattcccgaatgcgggctggtgtgcatcctcgatgccgacaaggaaggcttcctg
cgcagcgagaccagcctgatccagaccatcggccgcgcggcgcgcaatgtcgacgggcac
gtgatcctctatgccgaccgcatcaccggcagcatggaacgagcgatggcggaaaccgac
cgccgccgcgaaaagcagaaggcctataacgaggaacacggcatcacgccgcagacgatc
cgccgccagatcgccgatatcgtcgcgcataccgcgtcgcaggacggggtcacggtcgat
acgggcgatgacgagcgcaacaatctcgtcggtcacaatctgcgcgcctatatcgaggac
ctcgagaaacgcatgcgcaccgcggcggccgatctcgaattcgaggaagccggccgcctg
cgcgacgaaatccgccagctggagaacgacgaactcggtctcggcgatagcgagaagaag
gcgccgcgtgtcggccgcagcgatgcgggccgcccgggaacgcgcaagacccgctatggc
aagacgcaacggaagtttggcaagtaa
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integrated database retrieval system
