Qipengyuania profunda: SD421_08505
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Entry
SD421_08505 CDS
T10896
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
qpr Qipengyuania profunda
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qpr03032
]
SD421_08505 (topA)
03400 DNA repair and recombination proteins [BR:
qpr03400
]
SD421_08505 (topA)
Enzymes [BR:
qpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SD421_08505 (topA)
DNA replication proteins [BR:
qpr03032
]
Prokaryotic type
DNA Topoisomerases
SD421_08505 (topA)
DNA repair and recombination proteins [BR:
qpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SD421_08505 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WPL58438
LinkDB
All DBs
Position
1576365..1578956
Genome browser
AA seq
863 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGKDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDKQK
RFKEISDAAKGADRLVLATDPDREGEAISWHVRELLAKRKTLPAKVDRVTFNAITKQAVT
DAMKAPRELDQPLIDAYLARRALDYLYGFTLSPVLWRRLPGAKSAGRVQSVALRLIVDRE
IEIEHFRADEYWSVIAKLQQDGSEFDARLVRFEGKKLDKLTLGDEGSAAAAKQAVETANF
TVEEVETKPFKRNPAPPFTTSTLQQEAARKLGFSASHTMRCAQSLYEAGSITYMRTDGVS
MDGSAISACRKAVADRYGGHALPDSPRMYKTKAKNAQEAHEAIRPTDFNRDRAGSGDEGR
LYDLIFKRAMASQMAAASLERTTVTLREATGQHELRATGQVVKYPGFLAVYQEGRDDAED
DEEGLLPAIAKGDSPLKKGVEANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQTL
RDRAYVRMEKNRFFAEESGRLLTAFLERFFPQYVAFDYTAGLEDELDTVSDGREDWKKLL
EAFWRDFKPKTEEVMDKKPSEVTEVLDEFLSDYLFPERADGKDPRHCPLCETEGREGGRL
ALRGGRYGAFVACANYPDCKFTRQFAKPGGEGDDGADDGVMGEDPETGLPVERKTGRFGP
YIQLGEGKEAKRASIPKDLDDFDLEWALKLLSLPRIVGQHPESGKEIEAAIGRYGPYLRH
DGKYAKLQSTRDVFDTGMNAAVTLLAEAANRKGGTRGKAEPIKTLGEHPTSGAEMKVMPG
RYGPYVTDGTTNATIPKDMKPEDVTEAQAIELIDARAAKGPAKKKKAAPKKKAAAKKKPA
AKKAPAKKKAPAKKAAAKKAEAG
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtcatcgtcgaatcgcccgccaaggcgaaaaccatcgagaaatatctcggc
aaggacttcaaggttctcgccagctacggtcacgtccgcgacctgccgcccaaggatggc
agcgtgcgcccggacgaggatttcgcgatggactgggagctctatcgcgacaagcagaag
cgcttcaaggaaatcagcgacgcggcgaagggcgctgaccggctggtcctcgcgaccgac
cccgaccgcgagggcgaggcgatttcgtggcacgtgcgcgagctgctggcgaagcgcaag
acgctgcccgccaaggttgaccgggtgacgttcaacgcgatcaccaagcaggcggtgacc
gatgcgatgaaggcaccgcgcgagctcgaccagccgctgatcgacgcttatctcgcgcgc
cgcgcgctcgactatctctatggcttcaccctgtcgcccgtgctgtggcggcgcctgccc
ggcgccaagagcgcgggccgcgtgcaatcggtcgcgctgcggctgatcgtcgaccgcgag
atcgagatcgagcatttccgcgccgacgaatactggtcggtgatcgccaagctgcagcag
gacggcagcgagttcgacgcgcggctggtccggttcgagggcaagaagctcgacaagctg
acgctcggcgacgagggcagcgccgccgccgcgaagcaggcggtcgaaaccgccaacttc
acggtcgaggaggtcgagaccaagccgttcaagcgcaatcccgcgccgccgttcaccacc
tcgacgctgcaacaggaagccgcgcgcaagctcggtttttccgccagccacacgatgcgc
tgcgcgcagtcgctctacgaagcgggctcgatcacctacatgcggaccgacggcgtcagc
atggatggcagcgcgatttcggcctgccgcaaggcggttgccgatcgctatggcggccat
gcgctccccgacagcccgcggatgtacaagacgaaagccaagaatgcgcaggaagcgcat
gaggcgatccgcccgaccgacttcaaccgcgaccgcgcgggcagcggcgacgagggccga
ctctacgacctcatcttcaagcgcgcgatggccagccagatggccgccgcctcgctcgaa
cgcaccaccgtcacgctgcgcgaggccaccggccagcacgaattgcgcgccaccgggcag
gtggtgaaataccccggcttcctcgcggtctaccaggaagggcgcgacgatgccgaggac
gatgaagagggcctgctgcccgccatcgccaagggcgacagcccgctcaagaagggtgtc
gaggccaaccagcacttcacccagccgccgccgcgtttttccgaagccagcctggtcaag
cggctcgaggagctcggcatcggccgcccctcgacctatgccagcacgatccagacgctg
cgcgaccgcgcctatgtgcggatggagaagaaccgcttcttcgccgaggaaagcgggcgc
ctgctgaccgccttcctcgaacgcttcttcccgcaatatgtcgccttcgactacaccgcc
gggctcgaggacgagctcgacaccgtcagcgacgggcgcgaggactggaagaagctgctc
gaggccttctggcgggacttcaagcccaagaccgaagaggtgatggacaagaagccttcg
gaagtgaccgaggtgctcgacgaattcctgtccgactacctgttccccgaacgcgccgac
ggcaaggacccgcgccattgcccgctgtgcgaaaccgaaggccgcgaaggcggccggctg
gcgctgcgcggcggccgctacggcgcgttcgtcgcctgcgccaattaccccgactgcaag
ttcacccgccagttcgccaagcccggcggcgagggcgatgatggcgccgatgacggggtg
atgggcgaggatcccgaaaccggcctcccggtcgaacgcaagaccggccgcttcggcccc
tacatccagctgggcgagggcaaggaagccaagcgcgcgagcatccccaaggacctcgac
gatttcgatctcgaatgggccctgaagctgctcagcctgccgcgcattgtcggccagcat
cccgaaagcggcaaggaaatcgaagccgcgataggacgttacggcccgtacctgcggcac
gatggcaaatacgccaagctgcagagcacgcgcgacgtgttcgacaccgggatgaatgcg
gcggtcacgctgcttgccgaagccgccaaccgcaagggcggcacgcgcggcaaggcggaa
ccgatcaagacgctcggcgaacacccgaccagcggcgccgagatgaaggtgatgccgggg
cgctacggcccctatgtcaccgatggcaccaccaatgcgacgatccccaaggacatgaag
cccgaggacgtcaccgaggcgcaggcgatcgaactgatcgatgcgcgcgcggccaagggt
ccggcgaaaaagaagaaggccgcgcccaagaagaaggcggcagcgaagaagaagcccgcc
gccaagaaggcccccgcgaagaagaaggccccggccaaaaaggcagctgccaagaaggcg
gaggcgggctga
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