Qipengyuania profunda: SD421_09400
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Entry
SD421_09400 CDS
T10896
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
qpr Qipengyuania profunda
Pathway
qpr03420
Nucleotide excision repair
qpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD421_09400
03430 Mismatch repair
SD421_09400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qpr03400
]
SD421_09400
Enzymes [BR:
qpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD421_09400
DNA repair and recombination proteins [BR:
qpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD421_09400
MMR (mismatch excision repair)
Other MMR factors
SD421_09400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
DUF3553
HTH_32
Motif
Other DBs
NCBI-ProteinID:
WPL55695
LinkDB
All DBs
Position
complement(1755358..1757670)
Genome browser
AA seq
770 aa
AA seq
DB search
MTDLPTPSDAPENAQLPAYAARLNAPQREAVLTTEGPVLMLAGAGTGKTAALTARLAHLI
ATRRAWPSEILCVTFTNKAAREMRERVGRHIGDAVEGMPWLGTFHSIGARMLRRHAELVG
LKSNYTIIDPDDQLRLLKQLIQENDLDEKRWPARQLAGLLDRWKNRGLNPGDLDAVENES
YANGRGAQFYKLYQDRLKALNACDFGDLLLHMLNIFREHHDVLAQYQQRFKYILVDEYQD
TNQVQYLWLRLLAQARKNICVVGDDDQSIYSWRGAEVANILKFEKDFPGAAVVKLEQNYR
STPQILGAASGLINANSERLGKTLWTELPAGENIRVIGVWDGPEEARRVGEEIERLEREG
APLDQIAILVRAQYQTREFEDRFIQIGLNYRIVGGFRFYERAEIRDALAYLRTIAQPADD
LAFERIYNQPKRGLGAKTLEAMRRHARRTQMPLTAASLDLCDTDELPARAKNNLVALLGQ
FVHWREQVDKVTPSELLRRVLAESGYEDMLQKDRSAESAGRLENLTELARAMEDYDTLGD
FLEHVGLVMDNDRAGDGEKVTIMTMHAAKGLEFDHVFLPGWEEGVFPSQRAIDEGGLASL
EEERRLAYVAITRAKRRCTILHAANRRIYGQWTSSIPSRFIEDLPEEYLTSETTMTGGAS
LWRANWSETDDPFAHVSTNRPDRSGARGPGWQRALSSGYDATPKRLAEPGRSAASFAAQP
RSDISIGARVFHDKFGYGCVTDQEGNKLTIEFEKAGEKRVLDSFVTLADD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctccccaccccgtccgacgcgcccgagaatgcgcagcttcccgcctatgca
gcgcggttgaacgcgccccagcgcgaggccgttctgaccaccgaagggcctgtgctgatg
ctggccggagccggcaccggcaagaccgcggcactgaccgcacggctggcacatctcatc
gcaacgcgccgcgcatggccgagcgaaatcctctgcgtcacctttaccaacaaggccgca
cgcgagatgcgcgagcgcgtgggccggcatatcggtgatgcggtcgagggcatgccctgg
ctgggcacgttccactcgatcggcgcgcggatgctgcgccgccatgccgaactggtcggg
ctcaagagcaattacacaatcatcgatcccgacgaccagctgcggctgctcaagcagctg
atccaggaaaacgatctcgacgagaagcgctggcctgcgcgccagctcgccggcctgctc
gaccgctggaagaaccgcgggctcaatcccggcgatctcgatgcggtggagaacgaaagc
tacgccaatggccgcggcgcgcaattctacaagctctatcaggatcgcctgaaagcgctc
aacgcctgcgactttggcgatctgctgctgcatatgctcaacatcttccgcgagcatcac
gacgtgctggcgcaatatcagcagcgcttcaaatacatcctcgtcgacgaatatcaggac
accaaccaggtccagtatctgtggctgcgcctgcttgcccaggcccgcaagaacatctgc
gttgtgggcgacgacgaccagtcgatctattcatggcgcggcgcagaagtcgccaatatc
ctcaagttcgaaaaggattttcccggcgctgcggtggtcaagctggagcagaattatcgt
tccaccccgcagatcctcggggccgcatcggggttgatcaacgccaatagcgaacggctt
ggcaagacgctgtggaccgagcttcccgcgggcgagaatatccgcgtcatcggcgtatgg
gacggtcccgaggaagcccgccgcgttggcgaggagatcgagcggctcgaacgcgaaggt
gccccgctcgaccagatcgcgatcctcgtgcgcgcgcagtaccagacccgcgaattcgaa
gaccgattcatccagatcggcctcaattaccgcattgtcggggggttccgtttctacgaa
cgcgccgaaatccgcgatgcgctggcctatctgcgcaccatcgcccagcccgccgacgat
ttggctttcgagcggatctacaaccagcccaagcgcgggcttggcgcgaagacactggaa
gccatgcgccgccacgcacggcgtacacaaatgccgctgaccgccgccagcctcgacctg
tgcgacaccgacgaattgcccgcgcgtgcgaagaacaacctcgtcgccctgctcggccag
ttcgtccattggcgcgagcaggtggacaaggtcaccccatccgaactgctccgccgcgtg
ctcgccgaaagcggctatgaagacatgctgcaaaaggatcgcagcgccgaaagcgccgga
cggctggaaaacctcaccgaactcgcccgggcgatggaggactacgacacgctcggcgat
ttcctcgagcatgtcggactggtgatggacaacgaccgcgccggggatggcgagaaggtc
accatcatgaccatgcacgccgccaaggggctcgaattcgaccatgtcttcctgcccggc
tgggaagaaggcgtttttcccagccagcgtgcgatcgacgaaggcgggctcgccagtctc
gaggaagagcgccgcctcgcctatgtcgcgatcacccgggccaagcgccgctgcaccatc
ctgcatgccgccaaccggcgcatttacggccaatggactagttccatccccagccgcttc
atcgaggatctgcccgaggaatatctcaccagcgagaccaccatgaccggcggcgcatcg
ctgtggcgggcgaactggagcgagaccgacgatcccttcgcgcatgtttcgaccaaccgg
cccgatcgctcgggagcccgcggccccgggtggcagcgagcgctatcgtcgggctatgac
gcgacgcccaagcgcctggccgaacccggccgcagcgcggcgagctttgccgcgcaaccg
cgcagcgacatttcgatcggagcgcgcgtgttccacgacaagttcggctatggctgcgtg
accgaccaagaaggcaacaagctgacgatcgaattcgaaaaggcgggcgagaagcgcgta
ctcgacagcttcgtcacactggctgacgactag
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