Qipengyuania profunda: SD421_12300
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Entry
SD421_12300 CDS
T10896
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
qpr Qipengyuania profunda
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qpr03016
]
SD421_12300 (rnd)
Enzymes [BR:
qpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SD421_12300 (rnd)
Transfer RNA biogenesis [BR:
qpr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SD421_12300 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WPL56231
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All DBs
Position
2355313..2356515
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AA seq
400 aa
AA seq
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MKIHELITETAPLAELCERLAKSDFVCVDTEFMRENTYWPELCLVQIGNEEEAAAIDPLA
DGIDLTPLWDLMCDNDEVLKVFHAGGQDVEIVYNFTGKTPQPIFDTQIAMMAISQSEQIG
YANLVESWLGLTIDKGARFTDWGRRPLTERQIEYAIGDVTHLADIFPRILKKLMKTGRGV
WLDAEMEKLADPANYANDADIAWKRIRSPGRNPAVLGRLKALAAWRESEAQHKNIPRGRI
MRDETLADIASHPPKKQPDLIKVRGLSNAWKDNDIGKRLLKVLDKAEPLPKEEMPDKPKR
GAPLGKEGALVADLLKLLLKIRAREIDVASRLLTKADEMEALAAGARDLKILTGWRYEVF
GKDALELVEGRLAFAVKDGRLLMTHVDELHAGMVEAQAAE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacacgagcttattaccgagactgcaccgctggccgaattgtgcgagcgactg
gcgaaaagcgatttcgtctgcgtcgataccgaattcatgcgcgagaacacctattggccc
gagctgtgcctggtgcagatcggcaatgaggaagaggccgcggcgatcgacccgctggcc
gacggcatcgacctcaccccgctgtgggacctgatgtgcgacaatgacgaggtgctcaag
gtcttccacgccggcgggcaggacgtcgagatcgtctataatttcaccggcaagaccccg
cagccgatcttcgatacgcagatcgcgatgatggcgatcagccagagcgaacagatcggc
tatgccaatctggtcgaaagctggctgggcctcacgatcgacaagggagcgcggtttacc
gactggggccgccgcccgctgaccgagcggcagatcgaatatgcgatcggcgatgtcacc
catctggcggacatcttcccgcgcatcctcaagaagctgatgaagaccggccgcggcgtg
tggctcgatgccgaaatggaaaagctggccgatccggcgaattacgccaatgacgccgac
atcgcgtggaagcgcattcgctcgccggggcgcaatccggcggtgctcggacggctcaag
gcgctggccgcgtggcgcgagagcgaggcgcagcacaagaacatcccgcgcgggcgcatc
atgcgcgacgagacgctggccgatatcgccagccacccgcccaagaaacagcccgacctg
atcaaggtccgcggcctgtcgaacgcgtggaaagacaacgacatcggcaaacggcttctc
aaggtgctcgacaaggccgaaccgctgccgaaagaggaaatgcccgacaagcccaagcgc
ggtgcaccgctgggcaaggaaggcgcgctggtcgccgatctgctcaagctgctgctcaag
atccgcgcgcgcgagatcgacgtcgcgtcgcgcctgctgaccaaggccgacgagatggaa
gcgctcgccgcgggcgcgcgcgacctcaagattctgaccggctggcgctacgaagtcttc
ggcaaggatgcgctcgaactggtcgaaggccggctggctttcgcggtcaaggacggccgc
ctgctgatgacccatgtcgatgaactgcacgcgggcatggtcgaagcgcaggcagcggag
tga
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