Qipengyuania profunda: SD421_12345
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Entry
SD421_12345 CDS
T10896
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
qpr Qipengyuania profunda
Pathway
qpr00300
Lysine biosynthesis
qpr00470
D-Amino acid metabolism
qpr01100
Metabolic pathways
qpr01110
Biosynthesis of secondary metabolites
qpr01120
Microbial metabolism in diverse environments
qpr01230
Biosynthesis of amino acids
Module
qpr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SD421_12345 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SD421_12345 (dapF)
Enzymes [BR:
qpr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SD421_12345 (dapF)
SSDB
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WPL56240
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All DBs
Position
2367085..2367894
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AA seq
269 aa
AA seq
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MRVDFIKMHGLGNDFVVLDARTRTLPAIDAPVARALADRRTGIGCDQLILLEPSKSADFR
MRIFNQDGTEVGACGNASRAVALLHGAAVRVETAGGVIAVEPSGTGASVDMGEPRFDWEA
IPLAYGMDTAVMPVGWETLDQPGAVNVGNPHVIFFVEDTDAVPLETVGAQIETDPLFPER
VNVNVATILDRRHIRLHVWERGAGITRACGTGACATAVHAMRRGLAEREVTVTLPGGDLV
IAWGEDNRIRMTGPAAEAYRGSFEWDDFA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgatttcatcaagatgcacggcctgggcaacgacttcgtcgtgctcgacgcc
cgcacgcgtaccctccccgcgatcgacgcgcccgttgcccgcgcactggccgaccgccgc
accgggatcggctgcgaccagctgatcctgctcgagccgagcaaatccgccgacttccgc
atgcgcatcttcaatcaggacggcaccgaggtcggcgcctgcggcaatgccagccgcgca
gtcgcgctgcttcatggcgctgccgtcagggtggaaacagcgggcggcgtgatcgcggtc
gaacccagcggcactggcgccagcgtcgacatgggcgaaccgcgcttcgactgggaggcg
atcccgcttgcctatggcatggacaccgccgtcatgccggtcggctgggagaccctcgac
cagcccggcgcggtcaatgtcggcaatccgcatgtgatcttcttcgtggaggataccgac
gcggtgccgctcgaaaccgtcggcgcgcaaatcgagaccgatccgttgtttcccgagcgc
gtgaacgtcaacgtcgcgacaatcctcgaccgccggcatatccgcctgcacgtatgggaa
cgcggtgccggtatcacgcgcgcctgcggcacgggtgcctgcgcgaccgccgtgcacgcc
atgcggcgcgggctggccgaacgcgaagtgaccgtcaccctgcccggcggcgatctcgtc
attgcatggggcgaggacaatcgcatccgcatgaccggccccgcagcggaggcctatcgc
ggcagcttcgaatgggacgatttcgcgtga
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