Qipengyuania psychrotolerans: K3166_00580
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Entry
K3166_00580 CDS
T09867
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
qps
Qipengyuania psychrotolerans
Pathway
qps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
K3166_00580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qps03019
]
K3166_00580
03009 Ribosome biogenesis [BR:
qps03009
]
K3166_00580
04131 Membrane trafficking [BR:
qps04131
]
K3166_00580
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qps04147
]
K3166_00580
Messenger RNA biogenesis [BR:
qps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
K3166_00580
Ribosome biogenesis [BR:
qps03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
K3166_00580
Membrane trafficking [BR:
qps04131
]
SNARE
SNARE associated proteins
Others
K3166_00580
Autophagy
Aggrephagy
Other aggrephagy associated proteins
K3166_00580
Exosome [BR:
qps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K3166_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
AAA_5
CDC48_2
AAA_22
AAA_2
AAA_14
AAA_33
TIP49
IstB_IS21
nSTAND3
RNA_helicase
AAA_7
NPHP3_N
AAA_28
AAA_18
Mg_chelatase
NACHT
AAA_17
AAA_24
Sigma54_activat
AAA_3
DUF815
Parvo_NS1
AAA_11
ABC_tran
TsaE
AAA_19
AAA_30
Zeta_toxin
NB-ARC
Bac_DnaA
SLFN-g3_helicase
ResIII
PhoH
ATPase
Motif
Other DBs
NCBI-ProteinID:
QZD87245
LinkDB
All DBs
Position
106163..108472
Genome browser
AA seq
769 aa
AA seq
DB search
MADADAATAVEEKSVRLQVAAARQEESGQGIARMPRSAFQSLGITEGDTVQITGKRDTVA
IAMPAYDEDQSLDVIRLDGLQRGNAEVGSGEHVKVVAAESRPATRVVFAPANREMRLQGP
AQALKRNFFQKPIMAGDLVATTGQQPVQNMPQEVRRMFNAPAYALTQIRLSVVSTSPKGI
VHIDENTEVELRAEFEEPRDGRAVVNYDDVGGMGETIQQLREMVELPLRYPELFTRLGVD
PPKGVLLHGPPGTGKTRLAQAVANESDANFFTINGPEIMGSGYGDSEKALRQVFEEAAKA
SPAIIFIDEIDSIAPKRDRVPGEAEKRLVAQLLTLMDGLEARSNLVVIAATNRPDAIDEA
LRRPGRFDREIVIGVPDEQGRREILGIHTRGMPLGDRVDLQELAKATYGFVGADIGALAR
EAAIDAVRRIMPKIDLDERTIPPEVLDELCVTREDFVEALKRIQPSAMREVMVQMPNVGW
SDIGGVGDAIEKLKEGIELPMKNPEAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAKEAK
ANFISMKSSDLLSKWYGESEQQIARMFKRARSVAPCVIFIDEIDSLVPARGSGQGEPQVT
GRVVNTILAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELVYVGTPDKPGREQIL
GIHTANMPLADDVVLADVAEKTDRFTGADLEDVVRRAGLNALQRAGGDVQQVTSADFTEA
LNDSRATVTSRMEEEYKKMRGELKKRAAEVQPIGFIHEGMVESTRDQKH
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcggatgcagcgactgcggtagaagaaaaatcggtcaggttgcaggtagct
gcagcccgccaggaagaaagcgggcagggcattgcccgtatgccgcgctccgcgttccag
tcgctcggcatcacagaaggcgataccgtccagatcactggcaagcgcgacaccgtagcc
attgccatgcccgcttatgacgaagaccagtcgcttgatgtgatcaggctcgacggtctc
cagcgcggcaacgcggaagtcggctcgggcgagcatgtaaaggtggttgccgcagaatcg
cgcccggctacccgggtcgtcttcgcaccggccaatcgcgaaatgcggctccagggaccg
gcgcaggcattgaagcgcaatttcttccagaagccgatcatggcgggcgatctcgtggct
actaccggccagcaaccggtccagaacatgccgcaggaagtgcgccgcatgttcaacgcg
ccagcatatgccctgacccagatccgcctgagcgtggtttccaccagccccaagggcatc
gtccacattgacgaaaataccgaggtcgagctgcgcgccgagttcgaagaaccgcgcgat
ggccgcgccgtcgtgaactatgacgatgtcggcggcatgggagaaaccatccagcagctc
cgcgaaatggtcgagctgccgctgcgctatcctgaactgttcacacggctcggcgtcgat
ccgcccaagggcgtgctgctgcatggaccccccggaaccggcaagacccggctggcgcaa
gcggtcgccaatgaaagtgatgcaaatttcttcacgatcaacggacccgagatcatggga
tcgggctacggcgatagcgaaaaagcactgcgccaagtgttcgaggaagccgccaaggca
tcgcctgcgattatctttatcgacgagatcgattccatcgcgccgaagcgtgaccgcgta
ccgggtgaagccgaaaagcgcctggtcgctcaattgctcaccttgatggacggcctggaa
gcacgttcaaaccttgtcgtgattgcggcgaccaatcgccccgacgcgatcgacgaagct
ctgcgccgcccgggccggttcgaccgcgaaatcgtgatcggtgtgcctgacgagcagggc
cgccgcgaaatcctcggcattcacacccgcgggatgccgctgggcgaccgggtcgacctg
caggaactggccaaggccacttacggcttcgttggcgctgatatcggggccttggcacgc
gaggcggccattgatgcggtccgccggatcatgcccaagatcgatctcgacgagcggaca
attccgcctgaggttctcgacgaactttgcgtcactcgcgaagattttgtcgaggctctc
aaacgcatccagccttctgccatgcgcgaagtgatggtgcagatgcccaatgtaggctgg
tcggacatcggcggcgtcggcgatgccatcgaaaagctgaaagagggcatcgagctgccg
atgaaaaatccggaagcgttccgccgtctgggtatcaggccggccaagggcttcctgctt
tatggcccgccaggaaccggcaagacgctgctcgccaaggcggtcgccaaggaagcgaaa
gcgaacttcatctcgatgaagagctcggacctcttgtccaaatggtatggcgaaagcgaa
cagcagattgcgcgtatgttcaaacgcgcccgctcggtcgcaccatgcgtgatcttcatc
gacgagatcgacagcctcgtccccgctcgcggtagcggacagggcgaaccgcaggttacc
ggccgcgtcgtcaacaccatcctcgccgaaatggatgggttggaagaattgcagtcggtg
gtcgtgattggcgcgactaaccgtccaacgctggtcgatcctgcgctgctgcgtcctggc
cggttcgacgagcttgtttatgttgggacgcccgacaaacctggccgcgaacagatactc
ggcattcatacggcgaatatgccgctcgccgatgatgtggtgctggcagacgtggcggaa
aagacagaccgcttcaccggcgccgacctcgaagacgttgtgcggcgggcagggctcaac
gcccttcagcgcgcgggcggggatgtgcagcaagtgacctctgccgactttaccgaagcg
ctcaatgacagccgcgcgacagtgaccagccgcatggaagaggaatacaagaaaatgcgc
ggtgaactgaagaaacgcgctgccgaagtgcagccgattggcttcattcacgaaggcatg
gtcgaaagtacccgcgaccagaagcactga
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