Qipengyuania psychrotolerans: K3166_04775
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Entry
K3166_04775 CDS
T09867
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
qps
Qipengyuania psychrotolerans
Pathway
qps03410
Base excision repair
qps03430
Mismatch repair
qps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3166_04775 (recJ)
03430 Mismatch repair
K3166_04775 (recJ)
03440 Homologous recombination
K3166_04775 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qps03400
]
K3166_04775 (recJ)
DNA repair and recombination proteins [BR:
qps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K3166_04775 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K3166_04775 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K3166_04775 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
DUF2529
Motif
Other DBs
NCBI-ProteinID:
QZD87997
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Position
complement(968101..969888)
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AA seq
595 aa
AA seq
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MATSALPHVFGVSQSLTGRAWRWRGGNMDLGQGNFGNGEDIVRQILLARGVDQDDLNRHL
SPTLRDFLPDPSEFNDMDVAAERIAQAVLGQEKITVYGDYDVDGATSSALLIRLLRDLGV
DADYYIPDRLLEGYGPSGEALVKLGQTGSSLIVTVDCGAMAHEALGMARDAGIDVIVVDH
HKCAADLPRTAALVNPNRLDENDLAAAHGHLAAVGVAFLLAIALVRTLRAQGHFDDRKEP
DLLALLDLVALGTVADVAALHGLNRAFVAQGLKVMGKRANIGMSALIDASRLKRAPACSD
LGFALGPRINAGGRVGESTLGVRLLTTEDAEEAAAIADQLSALNEERRAIEAEVQQAAEE
QLGAQHNRAVHVLAANGWHPGVIGIVAGRIKEKTGKPSVVIAIDEQTGEGKGSGRSIPGV
DLGAAIIRASEEGLLVKGGGHAMAAGLTVASDKLDTFAEWLDAHLEGAVSRASGNREMLL
DIAVAPGGLTPELVESLDGGGPYGVGWPGPRIAVGPVRLVKCDIVGTDHVRLIASGDDGR
SFKGIAFRAAESDMGQALLHGSRGRRLWLAGRAKIDDWGSRRQAELHLEDAAFAD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccacttctgccctcccccatgtgttcggtgtctctcaatctctgacagggcgcgca
tggcgatggcggggcggcaacatggaccttggtcagggtaacttcggaaatggcgaggat
atcgttcgccagatactgctggcgcggggtgtcgatcaggatgacttgaacaggcatctc
tcgccaaccctgcgcgactttcttcccgatccatccgagttcaacgacatggacgtggcc
gcagaacgaattgcacaggccgtgctcggacaggaaaagatcacggtttacggcgattac
gacgtcgacggcgcgacaagttcggcgctcctgatccgtttgctacgtgatcttggtgtg
gacgctgactattacatccctgatcgcctgctggagggttacgggccgtctggcgaggca
ttggtcaaactggggcaaaccggttcgagccttatcgttacagtcgattgcggcgccatg
gcacacgaggcgctcggcatggccagagatgccgggatcgatgtcatcgtggtggatcac
cacaagtgtgctgcggatcttccccgcactgccgctctcgtcaatccgaaccgcctcgac
gaaaatgatctggctgcggcacatggccacctggccgccgtcggcgtcgccttcctgctg
gcaattgccttggtccgcaccctgcgtgcgcaaggccattttgacgaccggaaggagcct
gatcttcttgcgctgctcgacctggtggcccttggaactgtcgccgatgtcgcggctttg
catggcctcaaccgagctttcgttgcgcaaggcctgaaggtcatgggcaaacgcgcgaat
atcggaatgtccgccttgatcgacgccagccggttgaagcgggcacctgcctgttcagat
ctcggcttcgcactgggtccccgcatcaatgcaggggggcgtgtgggcgaatccacactt
ggtgttcgcttgctgacgaccgaggatgcagaggaagctgccgcgattgccgatcagttg
tcggcgctcaacgaggaacgccgcgcgatagaggcggaggtccagcaggctgcggaggag
caactcggcgcgcagcacaaccgggcggttcacgtgttggcggcaaacggctggcatcca
ggcgtgatcggcatcgttgccggacgcatcaaggaaaagaccggcaaaccttctgtggtt
atcgcgatcgacgagcagaccggagaaggaaaaggttcgggccgttcgatacccggagtc
gatcttggcgcggcaatcatccgggcgagcgaggaagggttgctggtcaaaggcggcggg
catgccatggcagcgggccttacggttgcaagtgacaagctggacacctttgccgaatgg
cttgacgcgcatctggaaggagcggtttcacgggcaagcggcaaccgcgaaatgctcctc
gatatcgcagtagccccgggcggcctgacccccgaactggtcgaatcgctcgatggcggc
ggaccttacggcgttggctggcctggaccgcggatagcggttggcccggtgcggctggta
aaatgcgacatcgtcgggaccgatcacgtccgcctgatcgccagcggcgatgacggccgc
agtttcaaaggcatcgcgttccgcgcggcggaaagtgatatgggtcaagcgctgcttcat
ggatcccgagggcggcgtctgtggctcgcaggccgcgcgaagatcgatgactggggcagc
cgacggcaagctgaactccaccttgaagatgccgcttttgcggactga
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