KEGG   Qipengyuania psychrotolerans: K3166_05880
Entry
K3166_05880       CDS       T09867                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
qps  Qipengyuania psychrotolerans
Pathway
qps03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:qps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K3166_05880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qps03019]
    K3166_05880
Messenger RNA biogenesis [BR:qps03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K3166_05880
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL RNase_J_C Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: QZD88198
UniProt: A0ABX8ZKI1
LinkDB
Position
1197131..1198786
AA seq 551 aa
MKKNFAPEDELLFLALGGSGEIGMNVNLYGCQGRWLMVDLGMTFSGGEYPGVDLVFADLE
FIEERLDQLEAIVLTHAHEDHIGAVPYFAADLGVPIYATPFTMDLVRRKLEEAGVLGEVE
LHTIPDDHGSFEVGPFEVTYIPLAHSIAEGNALLIDTPHGRIFHTGDWKLDEDPIIGEPA
TEEELTELGDKGILALVCDSTNVFNPAPSGSEGAVYKGLLEEAQRHSGKRILVTTFASNV
ARLHTLGEVAKETGRQLCVAGRSLDRIIEVAQANGYLDDFPDPVDFDTAMGLPRGEVLIL
ATGGQGEPRAALSRISEDNHPLQLVSGDVVLFSTRQIPGNELSIGAVQNRLAAKGITMVT
DRQSMIHVSGHPGRPELEALYGWIRPDVLVPVHGEMRHMQEQGRLGKANGIADAVVQQNG
DIVRLAPGAPGTIAQVRAGRLVLDGDIIAPAGGDAIVMRRRIMQEGVMIVALDSRLDPQI
DSLGLPLDEDYDDFIAETKEDVVNAIAKLKGKDRSTASSVHEAARLAARRAAQRWSGKRP
QVRVILPASMG
NT seq 1656 nt   +upstreamnt  +downstreamnt
ttgaaaaagaatttcgcacccgaagacgaacttctgttcctggccctcggcgggtccggc
gagatcggaatgaacgtcaacctttacgggtgccagggccgatggctgatggttgacctc
gggatgacgttttccggcggagaatatcccggcgtcgaccttgtatttgcagatctggaa
ttcatcgaagaacggctcgaccaacttgaggccatcgtgctgacccatgcgcatgaggac
catattggcgccgtgccatatttcgcggctgacctgggcgtcccgatctatgccacgccg
ttcacgatggacctcgtgcgtcgtaagctggaagaagcaggcgttctgggggaagtcgaa
ctgcacacgatcccggacgatcacggtagcttcgaagtagggcccttcgaggtgacctat
atcccgcttgctcactcaatcgccgagggcaacgcgttgctgatcgacacaccgcatggc
aggatttttcatactggggactggaaactcgacgaagatccgatcatcggcgaacccgcc
acggaagaagagcttaccgagctgggcgacaaaggcattcttgcactggtttgtgacagc
accaacgttttcaatcccgcgccaagcggctccgaaggggccgtttataaagggctcctg
gaagaggcgcagcggcattcgggcaaacgcatcctggtcacgactttcgccagcaatgtc
gcccggctccacaccttgggcgaagtggccaaggaaaccgggcgccaactttgtgttgca
ggtcgttcgcttgaccgcatcatcgaagttgcgcaggccaacggctatctggatgacttc
ccggatcctgttgatttcgacactgccatgggcctgccacgcggcgaggtcttgatcctt
gcaaccggggggcagggcgagccgcgcgctgctctttccaggatttctgaagacaaccat
ccacttcaactcgtttcaggcgacgtggttcttttctcgacgcgccagattcccggcaac
gaactttcgattggggccgtacagaaccgactggcggccaagggcatcacgatggtcacc
gaccgtcagagtatgatccacgtatctggccacccgggccgtcctgaactggaggcgctc
tatggctggatcagaccggatgtgctggtcccggtccatggcgaaatgcgtcacatgcaa
gaacaaggacggcttggaaaagcgaatggcattgcagatgctgtcgtccagcagaacggt
gacatcgtaaggctcgctcctggagcacccggcaccatcgcacaggtcagggcggggcgg
ctcgtgctcgacggtgatattattgcgccagcgggcggtgatgccatcgtgatgcgtcgg
cgcatcatgcaggagggcgtcatgatagttgcgctggacagccgtctcgacccgcagatc
gatagcctgggccttccgcttgacgaagactatgatgatttcattgcggaaaccaaagaa
gacgtcgtcaacgcaatcgcgaaactgaagggcaaggatcgcagcaccgcttcgtcggtc
cacgaagcggcacgccttgctgcgcgccgtgcggcacagcgctggtccggaaagcgtccg
caggtccgcgtgatcttgccggcgagcatggggtag

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