Qipengyuania psychrotolerans: K3166_07875
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Entry
K3166_07875 CDS
T09867
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
qps
Qipengyuania psychrotolerans
Brite
KEGG Orthology (KO) [BR:
qps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qps03016
]
K3166_07875 (rnd)
Enzymes [BR:
qps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K3166_07875 (rnd)
Transfer RNA biogenesis [BR:
qps03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K3166_07875 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QZD86191
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All DBs
Position
1600634..1601836
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AA seq
400 aa
AA seq
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MKIHDLITTSDALAHLCERLAKSDFVTVDTEFMRENTYWPELCLIQIANEEEAAAIDPLA
SGIDLGPLWDLMCDNEDVLKVFHAGGQDVEIVYNFTGKTPHPIFDTQIAMMAISQSEQIG
YANLVESWLGFTVDKGARFTDWSRRPLTDRQIEYAIGDVTHLSEIFPKILKKLIKTDRGG
WLNAEMEKLANPANYANDADLAWKRIRSSGRNPAVLGRLKALAAWREGEAQHKNIPRGRI
MRDETLADIASHPPKKQADLTKVRGLSNAWRDNDIGKRLLKVLDKAEPLPKDEMPDKPKR
GAPLGKEGALVADLLKLLLKIRAREIDVAARLLTRSDEMEALAAGVRKLPILEGWRYEVF
GKDALELVEGRLAFAVKDGKLLMTHIDDMESELSDAQAAE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacatgatctgattaccacttccgatgcgctggcccatctatgcgagcgcctt
gcgaaaagcgacttcgtcaccgtcgataccgaattcatgcgtgagaacacgtactggccg
gaactgtgcctcatccagatcgcgaatgaggaagaagctgcggccattgatccgctggcg
agcgggatcgacctgggcccgctctgggacctcatgtgcgacaacgaggatgtcctgaag
gtcttccacgctggcgggcaagatgttgaaattgtctacaatttcaccggcaagacgccc
caccccatcttcgatacgcaaatcgcgatgatggcgatcagccagtcggagcagattgga
tatgccaatctggtcgaaagctggctcggcttcacggtcgacaagggagcgcgcttcacc
gactggagccgccgccccctgaccgaccgacagatcgaatatgccatcggcgatgtcacg
catctgtcggaaatctttcccaagatactcaagaagctgatcaagaccgatcgcggcggc
tggcttaatgcggaaatggaaaagctcgccaatccggccaattacgcgaatgacgcggac
cttgcgtggaagcggattcgttcttccggccgcaatcctgccgttctgggccgtctgaaa
gcgctcgccgcatggcgcgaaggcgaagcgcagcacaagaacattccgcgcggccgaatc
atgcgcgacgaaactctggcggatattgccagccatccgcccaagaaacaggccgacctc
accaaggttcgcggcctgtccaatgcgtggcgtgacaatgacataggcaaacggctgctg
aaggtgctcgacaaggcagagccgctgccaaaggacgaaatgcccgacaagcccaagcgc
ggcgcaccgctgggcaaggaaggcgcattggtcgccgacctgctcaagctgctcctcaag
atccgggcccgcgagatcgacgttgcagcccgcctcctgacccgttccgacgagatggaa
gcgctggctgccggcgtgcgcaagctgccgatcctcgagggttggcgctacgaagtcttc
ggcaaggacgcgctcgaactcgtcgagggccgcctcgccttcgcggtcaaggacggcaag
ctgctgatgacccacatcgacgacatggagagcgaactgagcgacgcgcaggccgcagag
tga
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