Qipengyuania psychrotolerans: K3166_12330
Help
Entry
K3166_12330 CDS
T09867
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
qps
Qipengyuania psychrotolerans
Brite
KEGG Orthology (KO) [BR:
qps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qps03032
]
K3166_12330
03036 Chromosome and associated proteins [BR:
qps03036
]
K3166_12330
03400 DNA repair and recombination proteins [BR:
qps03400
]
K3166_12330
DNA replication proteins [BR:
qps03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K3166_12330
Chromosome and associated proteins [BR:
qps03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K3166_12330
DNA repair and recombination proteins [BR:
qps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K3166_12330
BRITE hierarchy
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
ClpB_D2-small
HU-DNA_bdg
BHD_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QZD86956
LinkDB
All DBs
Position
complement(2540750..2541031)
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELLAAIAEDNPDLRPEEVEQVVDIFFEELAQRLSDGGRVELRGFGAFSTRERQARQ
GRNPRTGEVVDVPAKRVPYFKPGKDMRDKLNQH
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatccgaacttcttgccgcgattgcggaagacaaccccgatctgcgccccgaa
gaggtcgaacaggtggtcgatatcttcttcgaggaactggcccagaggctttccgatggc
ggccgggttgaactgcgcggattcggtgctttttcgactcgggagcgtcaggcacgccag
ggacgcaatccgcgcaccggcgaagtcgtcgatgtgccggccaagcgtgtgccgtatttc
aagcctggcaaggatatgcgcgacaagctcaaccagcactaa
DBGET
integrated database retrieval system
