Qipengyuania psychrotolerans: K3166_12545
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Entry
K3166_12545 CDS
T09867
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
qps
Qipengyuania psychrotolerans
Pathway
qps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K3166_12545 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qps03400
]
K3166_12545 (xseA)
Enzymes [BR:
qps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K3166_12545 (xseA)
DNA repair and recombination proteins [BR:
qps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K3166_12545 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
DHQ_synthase
DAO_C
Motif
Other DBs
NCBI-ProteinID:
QZD86993
LinkDB
All DBs
Position
complement(2580580..2582046)
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AA seq
488 aa
AA seq
DB search
MPADFPSNPEEDSLVAKGRAGDNAAPLSISEISSLLKRAVEDQFGFVRLRGELSGVKRAA
SGHLYCALKDEKAVIDGVMWRGNTQRLPFQPEDGLEVVASGKLTTYPGRSKYQIVIERME
LAGEGALLALLEKTKARLTAEGLFDEGRKRALPFLPRTIGVVTSPTGAVIRDILHRLADR
FPSRVIVWPVLVQGKGAADQVAAAVRGFSGLPAGHPDRPDLVIVARGGGSIEDLWSFNEE
AVVRAIAECSMPTISAVGHETDTTLADFAADRRAPTPTAAAEMAVPVRAELAATLADFGA
RKERAILRPVQLGRERLEARVQRLPGPAALLQPPAQALDDLSDRLRRGLTDRTARGREKL
GKLRLPPAILERGLREATRSLESIRLMPSMVERRLAEKRARLGALERVMRSLDPDAVLQR
GYARVLGPDGHTLTSQTEASKEAALTLKFRDGDLAVTTDKSRAAPPAPRSKPKSKPAGAP
PTQDDLFG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgatttcccgtcaaacccagaagaagacagcttggtagcgaagggccgcgcc
ggggacaacgctgccccgctttcgatcagcgagatttcttcgctcctgaagcgggccgtg
gaagaccagttcggatttgtgcgcctgcgcggcgagttgtccggcgtgaaacgtgcagcc
tcgggtcacctgtattgcgccctcaaggacgagaaggctgtcatcgatggcgtgatgtgg
cgcggcaatacgcagcgcttgccattccagccggaagatggcctggaggtcgtcgcatca
ggcaagctgacgacctatccagggcgctccaagtaccagatcgtaatcgagcggatggag
ttggcaggcgaaggtgcgctgctggctctgctcgaaaagaccaaggcgcggctgacagca
gaagggcttttcgacgaagggcgcaagcgtgccctgccattcctgccgcgaacgatcggg
gtggtgacgtcccccacaggcgcggtgattcgcgacatcttgcaccggttggcggaccgg
tttccgagccgcgtaatcgtgtggcccgtgctggtgcagggcaagggtgcagcagatcag
gtggcagccgcagtgcgcgggttctcgggcctgccagcaggccatcccgaccgtcctgac
ctggtgatcgtggcacgtggcggcggctcgatcgaggatctgtggagcttcaacgaagaa
gctgtcgtccgcgccatcgccgaatgctcgatgccgacgatcagcgctgtgggtcacgag
accgatacgacgctggccgattttgccgccgaccgccgcgctccgacgccgacggcggcc
gcagaaatggccgtcccggttcgcgccgaactcgcggcgacactggcggacttcggcgcg
cgcaaggagcgcgcgatcctgcggcccgtacagcttggccgcgagcggctggaggcgcgg
gtgcagcggcttcccggccctgcggcgctgcttcagccaccggcgcaggctctcgacgac
ctgtcggaccgtctgcggcgtggtttgaccgatcggacagcgcggggccgcgaaaagctg
ggcaagttgcgattgcccccggcgatactcgaacgcggccttcgcgaggccactcgttcg
cttgaaagcatacgcctgatgccctcgatggtggaacgccgcttggcagagaaacgcgcg
cgcctcggcgcacttgagcgggtcatgcgctcgctcgatccggacgccgtcttgcagcgc
ggctatgcacgggttctgggtcctgatggacatacgctgacgtcccagacggaggcgtcg
aaagaggcggctctgacgctgaagttccgcgacggcgatctcgcggtcaccacggacaag
tccagggcagcgccgccagcgcctcgatcaaagcccaagtcgaaaccggcgggagcgccg
ccaacgcaagatgatttgtttggctag
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