Quillaja saponaria (soapbark tree): O6P43_000234
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Entry
O6P43_000234 CDS
T09778
Name
(GenBank) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03013
Nucleocytoplasmic transport
qsa03015
mRNA surveillance pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_000234
09122 Translation
03013 Nucleocytoplasmic transport
O6P43_000234
03015 mRNA surveillance pathway
O6P43_000234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_000234
03041 Spliceosome [BR:
qsa03041
]
O6P43_000234
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
O6P43_000234
TREX complex
O6P43_000234
Spliceosome [BR:
qsa03041
]
Complex C
Other components
EJC/TREX
O6P43_000234
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
O6P43_000234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-ProteinID:
KAJ7980889
UniProt:
A0AAD7VMI2
LinkDB
All DBs
Position
1
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AA seq
250 aa
AA seq
DB search
MSAALDRTLDDIIKSNKKSGSGNSRGRGRGSGSGPGPARRFSNRAANRAANRAAPYTAAK
APETAWKQDMFMDQPAVAFQAQAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDLK
RYAIHYDRSGRSKGTAEIVFSRRTDAAAAVKRYNNVQLDGKPMKIEIVGTNIAMPAVAPT
ANGAFGNSNGIPRGGQGRGVARGRSRAGGAPRGRGFGGGRGRGRGRGEKVSAEDLDAELE
KYHAESMQIN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgctttggataggacccttgacgatatcatcaagagcaacaaaaagtccgga
tccggtaattcccggggccgtggccgtggatctggttccggacctggccctgctcgccgc
ttctctaaccgtgctgctaatcgtgctgctaatcgtgcggcaccttatactgccgctaag
gcgccggagacagcatggaagcaggatatgttcatggatcagccagcggtagcgtttcaa
gcacaagctgggcgagcgtcttctatagaaaccgggacaaagctctacatatctaatttg
gattacggtgtttcaaacgaggatatcaaggaattgttttctgaagttggtgacctgaaa
agatatgcaattcattatgacaggagtgggagatcgaagggaacggcagaaatagtcttc
tctcggcgaacagatgcagctgctgctgtaaagagatacaataatgttcaacttgatggg
aaaccaatgaagatagagattgtgggaactaatattgcaatgcctgctgtggctcctact
gccaatggtgcttttggaaattcaaatggaattcccagaggtggacaagggaggggtgtg
gcacgaggaaggtcacgtgctggtggtgcccctagaggtcgtggttttggagggggtcgt
ggacggggaagaggccgtggtgagaaggtatctgccgaagatcttgatgctgaattagag
aagtatcatgcagaatcaatgcagattaactaa
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integrated database retrieval system