Quillaja saponaria (soapbark tree): O6P43_000401
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Entry
O6P43_000401 CDS
T09778
Name
(GenBank) syndetin isoform X1
KO
K23288
syndetin
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsa04131
]
O6P43_000401
Membrane trafficking [BR:
qsa04131
]
Protein recycling
Others
EARP complex
O6P43_000401
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
HTH_Tnp_Tc3_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7981083
UniProt:
A0AAD7VMK7
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Position
1
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AA seq
836 aa
AA seq
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MRNVKHFNAILQYFRFRKQGSSSSCSRSSCCLCSCRFTTSSEDFDPVRHILEHVPSEENE
LAYFEKQAALRLAQLDKIADQLSRQVMEHHEVMVKGMNLVGELEKDLQIANVICMNGRRH
LTSSVNEVSRDLIVNSNSKKKQALLDMIPILAELRCALNMQSALESLVEEGNYCKMSHGA
EVWLGKMLQKLDALLLGVCKEFMEEGYITEEDVLTQNSRLTYSDLCLQISESSFRQCLLR
TLAVLFKLMCSYHNIMGFQLDNKDSVAQALNMKCNDDISYNSHEVRQVNSDAGTCIASSS
DSRDKISSSSPCWVPTTTSSLVETTKTTVSQCTDCPYPVDEAKREDSAGSSSESPWYQLQ
KEATAFVSQTLQRGRKNHSLLVVYRYCFHLLQQKLKVVCENYFVAIHRQNVHALKMVLEK
ETWFILPPDTVQFISFAGLIGDGTPLIVSSDGSSTISRVNHSDKSTDSVHTSIKKIGFSD
WLHSGNPFLQNVFTSKEGHSYSQPNGTICGEVDGNISDNFHGDEVSPRKSNSNKTNGTDS
VLEDENEDLLADFIDEDKITAQTGSSISLLRSVDKYARLMQILEIVNVEFFKQHTNLSGK
GSADSLNYRLRKALSRITQDCNQWIKPQSTSPAALSASFTYTDVTPTSPLNTNFGHFPGT
SLGLKERCVGADTVSLVARILHRSKAHLQSMLLKSNTTAVEDFHTQLVDAVPDLTEHIHR
TTVRQLLHVNGYVDRIANAKWELKDLGLEHNGIGALVIFLHSECMSICCWENSSTIKRGL
LMEEFAKSLVTQARSMCAHIMVDIYRTRQMLASSLAHIKNPTILSAASRLTIRIWA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgtaaaacatttcaacgccattctccaatacttccgatttagaaaacaaggt
tccagctcgagctgcagccgcagcagctgttgcttgtgctcttgcaggtttaccacctca
tcagaggactttgatccagttaggcatattttagagcatgttccatcagaagaaaatgag
ctagcttatttcgagaaacaagctgctcttaggcttgcacagttagataaaatagcagat
cagttgtctcgacaagtgatggagcatcatgaagttatggtgaaggggatgaatttggtt
ggggaattagagaaagacttgcaaattgcaaacgtcatctgcatgaatggaagaaggcac
ttaacctcatctgtgaatgaggtttcaagggatctcattgtgaattctaattccaaaaag
aaacaagctcttttggacatgattccaattttagctgaacttcgatgtgcattgaacatg
caatcagcacttgaatctcttgttgaggaagggaattactgcaagatgagtcatggagca
gaggtttggttggggaaaatgcttcaaaagctggatgcactactgttgggtgtatgtaag
gaatttatggaagaaggctacataactgaagaggatgtactcacgcaaaatagcaggctc
acttacagtgatctatgccttcagatatcagaatctagctttaggcagtgcttattgcga
acactagctgtcctatttaagctaatgtgttcataccacaatattatgggatttcagcta
gataacaaggattcagtggcccaagctctaaatatgaagtgcaatgatgatatttcctat
aattcgcatgaggttcggcaagttaattcagatgcaggaacctgcattgcctcttcctcc
gattctagggacaaaatatctagttcatctccttgttgggtacctacaaccaccagttca
ttggttgaaacaaccaaaactactgtttcacaatgtacagattgcccatatccagttgat
gaggctaaaagagaagacagtgcaggatcaagcagtgaatccccctggtatcagctgcag
aaagaagctacagcttttgtttcacaaacccttcagagaggacgcaagaatcactcacta
ctagttgtgtatcggtattgctttcatctcctgcagcagaagctgaaggtcgtttgtgaa
aactattttgtagctattcatcgacaaaatgtacatgcattaaaaatggttttggagaag
gaaacttggtttatattaccaccagatacagtacagtttataagttttgctgggcttatt
ggtgatggcacgccattgattgtttcatcagatggtagctcaactatttccagggtgaat
cattcagataaatctacagactcagtccatacaagtatcaagaagattggattctctgat
tggcttcacagtggaaacccatttttgcaaaatgtatttacttcgaaagaaggtcatagt
tactcccaacctaatgggacaatctgtggcgaagttgatggaaatataagcgacaatttt
catggtgatgaggtctcgcctagaaagagcaattcaaataaaacaaatggcactgattct
gttttggaagatgaaaatgaagatcttcttgcagactttatcgatgaagacaagattaca
gcacaaacaggatcttcaataagtcttttgaggtctgtggataaatatgctaggcttatg
cagatattagaaatagtcaatgttgagttctttaagcaacacactaatttgagcggaaaa
gggtctgctgactctcttaattatcggctgcggaaagccttatccagaataactcaagat
tgcaatcagtggataaagcctcagtccacttcacccgcagctttgagtgcatcatttaca
tatacagatgtcacacctacaagccctctaaacacaaattttggtcactttccagggaca
tctttgggtctcaaggaaagatgtgtgggtgctgacactgtttctcttgttgctcgaata
ttacatagatcaaaggcccatctccaatcaatgctcttgaaaagtaacacaactgcagtt
gaggatttccatacacaactggtggatgctgtgccagatcttaccgagcacattcatagg
acaacagtgagacaacttctgcatgttaacgggtatgtcgatcgaattgctaatgctaag
tgggagctaaaagatctgggcctagagcataatgggattggggcattggtcatctttcta
cacagtgaatgtatgtcgatttgttgttgggagaattcaagcactataaaacgaggcttg
ctcatggaggaattcgcaaagagtttggtcacacaagcacgtagtatgtgtgctcatatc
atggttgatatctatagaacaaggcaaatgctagcttcatccttggctcacatcaagaat
cccaccattttgagtgcagcttcaagacttactattagaatatgggcttga
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