KEGG   Quillaja saponaria (soapbark tree): O6P43_001457
Entry
O6P43_001457      CDS       T09778                                 
Name
(GenBank) flowering time control protein FY-like
  KO
K15542  polyadenylation factor subunit 2
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    O6P43_001457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_001457
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     O6P43_001457
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_WDR75_1st eIF2A Tricorn_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SPT8 WD40_like Beta-prop_Vps41 Beta-prop_HPS5 Pep3_Vps18 NBCH_WD40 PEP5_VPS11_N Beta-prop_DCAF12 WD_LRWD1 B-prop_COPA_B_2nd
Other DBs
NCBI-ProteinID: KAJ7982317
UniProt: A0AAD7QIT1
LinkDB
Position
1:complement(9402599..9414237)
AA seq 744 aa
MMYGDPHHQQHQQQQQPPPPPQQQHYHHQQQHNQHPGGDFHRGPPPPPMMRQPSASSSTL
GPEYHHPSAGGPPPHYDAHGDNFAAKRMRKPTQRRAVDYTSTVVRYTQIRMCQRDSRDRT
VLQPTPAAAIDMLPPVAYSDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQS
GEFTLWNGQSFNFELILQAHDQAIRSMVWSHNDNWIVSGDDGGSIKYWQNNMNNVKANKS
AHKESVRDLSFCRTDLKFCSCSDDNTVKVWDFARCQEERSLSGHGWDVKSVDWHPTKSLL
ASGGKDYLVKLWDARTGKELSSFHGHKNTVLYVKWNQNGNWVLTASKDQIIKLYDIRAMK
ELESFRGHRKDVTALAWHPFHEEYFVSGSSDGSIFHWLVGHESPQVEIPNAHDNSVWDLA
WHPNGYLLCSGSNDHTTKFWCRNRPGDTARDKFNMGAQGYGEQNPSFAGRMAGNFPVAEA
PTTPGPFAAGLMRNEGTIPGVGVAMPLSIPSLDASQGEQKQPLPVSIPLGAPPLPPGPHP
SLLAANQQQAYHQNPQQIPQHHQQHQALPQQMPHMPMPPPNMQQLQHPSHLPLLPHPHLA
RPPQQMPPLNMPSPIPSSMPGSMQVPSSLPMAMPGPMGMQGAMNQMGPSTPQGHYVGMNP
MHSGSLPTSGPQSAVGGFGNSMPNMQGQSNASGTQMYPQGGPFNRPQAGQRPMMPGYNPY
QSGNQSGMPPPQPPGPPQHSQTPQ
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgatgtacggtgatcctcatcaccagcaacaccagcagcagcagcagccgccaccgccg
ccacaacaacaacattatcatcatcagcagcagcataatcagcatcctggaggggacttt
cacagaggaccgccgccaccacctatgatgcgccagccttctgcttcctccagtactctt
ggcccagaatatcatcatccctctgctggtggccctcctcctcattacgatgctcatggc
gataattttgctgcaaagagaatgagaaaacccacccaaaggagggcagttgattatacc
agcactgtcgtgagatatacgcaaattcgtatgtgccaacgtgattcaagggataggaca
gtgttgcaacctaccccagcagcagcaattgatatgttgccgccggttgcatattcagac
aatccatctacaagctttgctgctaaatttgttcatacatctcttaacaaaaaccgttgc
tcaattaatcgagttttgtggacgccgacgggccggcgtcttataacaggttcacaaagt
ggggaattcactctttggaatgggcaatcttttaattttgaattgattcttcaggcccat
gatcaagcaataaggtctatggtctggagtcacaatgacaattggattgtctctggtgat
gatggaggctcaataaagtattggcagaacaacatgaacaatgtgaaggccaataagtct
gctcataaagaatcagtccgtgacttaagtttctgtagaacggatctgaagttttgttcc
tgctctgatgataatactgttaaagtttgggattttgcacgttgccaagaagagcgttca
ttatctggccatggttgggatgtgaagagtgttgattggcaccctacaaaatctcttttg
gcttcaggtgggaaagactacctcgtcaaactttgggatgctagaactgggaaagaactt
tcctcatttcatggacacaaaaacacagtgctctatgtcaaatggaatcaaaatggcaac
tgggtgctaactgcgtcgaaggatcaaattatcaagctctatgacataagggctatgaag
gagctcgaatctttccgtggacataggaaggacgttactgctttggcttggcatccattc
catgaagaatactttgtcagtgggagctctgatggatccattttccattggctggttggg
catgaaagtccccaagttgaaattccgaacgctcatgacaacagtgtgtgggaccttgcg
tggcatcccaatggataccttctttgcagtggtagcaatgaccacaccacaaagttttgg
tgtagaaataggccgggtgacactgctcgtgataaatttaacatgggtgcccaaggttat
ggtgagcaaaatccctcttttgctggtcgcatggccggtaattttcctgtagctgaggca
ccaacaacaccaggaccatttgctgctggattgatgcgaaatgaggggaccattccaggt
gttggagttgcaatgccactatccattccatcacttgatgcatctcaaggggagcagaaa
cagcctcttccagtttcaatacctttaggtgcccctcctctcccacctggtccacatccc
tcacttcttgctgccaatcagcagcaagcataccatcaaaatcctcaacagatcccacaa
caccaccaacaacatcaggcactccctcagcaaatgccacatatgcctatgcctcctcca
aatatgcaacagctacagcatccgtcccatttacccttgctcccacatccacatttagct
cgaccgccacagcaaatgcctcctcttaatatgccctcacctatcccatcttcaatgcca
ggatccatgcaggttccctcatcacttccaatggcgatgcctggtccaatgggcatgcaa
ggtgcaatgaatcagatgggtccttcaacaccacaagggcattatgtgggcatgaatccg
atgcattcaggatccttgcccacaagtggaccgcaatctgctgttggaggctttggaaac
agcatgcctaatatgcagggtcaatcaaatgcgagtgggacccaaatgtatcctcaaggt
ggtccattcaaccggcctcaagctggacaaaggccaatgatgcctgggtataatccttac
cagtctggaaatcaatctggcatgcctccaccacagccaccaggtccaccgcagcactct
caaacacctcagtag

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