KEGG   Quillaja saponaria (soapbark tree): O6P43_001480
Entry
O6P43_001480      CDS       T09778                                 
Name
(GenBank) DNA-directed RNA polymerase subunit
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    O6P43_001480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsa03021]
    O6P43_001480
Enzymes [BR:qsa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     O6P43_001480
Transcription machinery [BR:qsa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     O6P43_001480
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1
Other DBs
NCBI-ProteinID: KAJ7982346
UniProt: A0AAD7QIX2
LinkDB
Position
1
AA seq 1841 aa
MEENPSTTVLDGEIVGIRFALATHQEICTASISDSAISHASQLSNPFLGLPLEFGRCESC
GTSEPGKCEGHFGYIKLPVPIYHPSHFPNKSNGLAQRLLSSCCEGGSQVSIREVKTTDGA
RSLELKLPSRSRLRDGFWNFLEKYGFRYGDNFTRTLLPCEVMEIIKRLPDETRKKLAGKG
YFPQDGYIVEYVPVPPNCLSVPEVSDGISVMSSDPSITMLKKVLKKVETIKGSRSGVPNF
ESHEVEAADLQSAIDQYLQVRGTGKVSRGIETHFGVSKELNDSSTKAWLEKMRTLFIRKG
SGFSSRSVITGDAYKRVNEIGIPLEVAQRITFEEKVNAHNISYLQELVDKNCCLTYREGL
STYSLREGSKGHTYLRPGQIVHRRIMDGDIVFVNRPPTTHKHSLQALAVYIHDDHTVKIN
PLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSF
KSLFKMYFLDRVAAQQLSMFLSPYLPQPAFLKAHSTGPCWTALQMLQSSLPSCFDCTGDQ
YLAKKSEILQFDFNRDAVPTVINEIATSIFFEKGPEEVLKFFDVLQPFLMENIFAEGFSV
SLKDFSISDEERRNIGKSIAMISPLLYHLRTLYNELVAQQLEDHVRVLKLPVTNFILKSS
SLGDLVDSRSDSAINKIVQQIGFLGLQLSDKGKFYSKSLIEDVASLFHSKYSSYGDDYPS
AEYGLLKGCFFHGLDPYEEMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDG
TVRNVCSNSIIQFEYGIVTGNRTQNLFPAGEPVGVLAATAMSNPAYKAVLDATPSSNSSW
ELMKEILLCKVSFKNEAIDRRVILYLNDCCCGKKYCQENAAYSVKNQLRKVSLKDTATQF
LIEYKTERTVSESDAGLVGHIHLNEMLLKEFNVSMADVVIKCQETLKSFHKKKKVGHVFR
RTVLFFSECCSYQQSCVPCLMFFWKDGSDITLERISNILSDMIFPVLLETIIKGDPRISS
ASIIWINPDTTTWIRNPYRSPKGELALDVILEKAAVNQNGDAWRIVIDSCLPVLHLIDTR
RSIPYAIKQIQELLGVSCAFDQAVQRLSTSVTMVAKGVLKEHLILLANSMTCAGNLVGFN
TGGYKALSRSLNVQVPFTEATLFTPRKCFERAAEKCHMDSLSSIVGSCSWGKHVAVGTGS
KFELLWDTKEVGLNQDSGTDVYTFLHMVKSTVGEEESNTACLGMEIDDLVLEEDWAMSPE
HSSGFDRPVFEDNIELMNSPETNPGESTWEKVSSLSNNSSKSEWTADRSMEDNTTKDTVW
SSWSTDKTRKDVLPAMSEKDSSRSNGWDALATPRGEVEDADKNNYARNKLEKSNAWSSWA
TDKTKTQDMWSNSAPKDCSRSDKWNAATEKALSVQKDQAITPEAAQENSGKENIWSRWDV
NKGESENSSISGGWNAATENAWSVQNDQAVTPDASQENYGKKNIWSVNKGESENSSRSGG
WNAATAATENVWPVQKNQNVTADVVAGQKAGMKNVSSGWDINRGESENSSRSNSWNNWVK
NADDAGGSGFSMPDAVQEASDWDEKVSKKTEIQSTTGWGSSVAGDLTTDEHPSHTINSSW
RKQRYQENQGGWDSQNGGCNSESEKGHSWGWNGRESSKKNHSEGARGWGSNAGERKFKNN
PASGVANQDSSMSGIYTATRQRLDVFTSEEQDILTAIEPVMQSIRRIMHQSGYNDGDPLA
AEDQSFVLENVFKYHPDKATKMGPGIDHVMVSRHSSFLESRCFYIVLTDGWKEDFSYRKC
LDNFIREKYPDIAETFTAKYFRKPRAGGNRERNPTPEETKS
NT seq 5526 nt   +upstreamnt  +downstreamnt
atggaagaaaacccttctacaactgttttagatggagaaattgttggaatcagatttgct
ttggcaactcaccaggaaatttgtacagcatccatcagtgactctgcaatcagtcacgct
agtcagctatcaaatcccttccttggcctacctcttgaatttggaaggtgtgaatcctgt
ggtacttctgagccaggaaaatgtgaaggtcattttggatatattaagctgccagttcct
atatatcatcctagtcattttccaaacaagagcaatggtttagcgcagagattgttgtct
tcatgttgtgagggtggttcacaagtttctattcgagaagttaaaacaacagatggtgct
cgttccttggaactaaagctaccatctaggtcaagactacgagatggtttctggaacttt
ttagaaaaatatggttttcgctatggagacaacttcactcgaactttgcttccttgtgag
gtgatggaaattatcaaaagacttcctgacgagacaagaaaaaagcttgctggcaaaggc
tattttcctcaagatggatacattgtggaatatgtgcctgtacccccaaattgtttgtct
gtacctgaggtttcagatggtatcagcgtcatgtcttcagatccttctataacaatgctc
aagaaagtactgaagaaagtggagaccatcaaaggatcgagatctggagtcccaaatttc
gagtctcatgaagtggaggcagctgatttacaatcagctattgaccagtatctccaagtt
aggggtactgggaaggtttctcgcggcattgagacacactttggagtaagtaaggagctg
aacgattcatcgacaaaagcatggcttgagaagatgagaacacttttcattcggaaaggt
tcggggttctcctcaagaagcgtgataactggggatgcatataagcgggtgaatgaaatt
ggaattcctcttgaggttgcacaaaggattacctttgaggagaaggtaaatgcacataac
ataagctatctgcaagaattagtggataagaactgttgcctgacctacagggagggtttg
tcaacttattcactgagagaaggatcaaaggggcatacatatcttagacctggtcagata
gtacatagaagaattatggatggagatattgtctttgtcaataggccgccgactacccac
aagcattcattacaagcactggctgtctatattcatgacgatcatactgtcaagataaac
cctcttatctgtgggccattgagtgcagattttgatggcgattgtgtacacctattttat
ccacagtctcttgctgccaaagcagaggttttagagcttttctcagttgagaaacagttg
cttagctcccatagtggcaatcttaacttgcaactggccactgattcattgttgtctttc
aaatcattgttcaagatgtactttttagacagagtggcagctcaacaattatcaatgttt
ctttcgccttatttaccacaacctgctttcttgaaagctcattctactggcccttgttgg
actgctttacagatgttacagtcctctttgccttcctgctttgactgcactggagaccaa
tacttggcaaagaaaagtgagattctgcagtttgactttaacagagatgcagtgcctact
gtgataaatgaaattgcaacttcaattttctttgagaagggtcccgaagaggtcctgaag
ttctttgatgtgttacaaccatttctgatggagaatatatttgctgaaggtttcagtgtt
agtctgaaagatttttcaatatctgatgaagaaagaaggaatataggcaagagtattgcg
atgatctctcctttgttatatcacctaaggacattgtacaatgagctggtggcacagcaa
ttggaggatcacgttcgagttctgaaacttccagtgaccaattttatattgaagtcatct
tcactgggtgatttggttgattcaaggagtgattcagccattaataagattgttcaacag
ataggatttttgggcctgcaactttcagataagggaaaattctactcgaagtcattgatt
gaagatgtggcctcccttttccatagcaaatatagttcctatggagatgattatccatct
gctgaatatggactattgaaaggctgtttttttcatggcttagatccctatgaggaaatg
gttcattcaatctccacaagagaagtcattgtgcgctcgtcaagaggattgtcggaacct
ggcacattattcaaaaatttgatggctatccttcgagatgttgtgatatgctatgacggg
actgtgcggaatgtttgtagcaattcaatcattcagtttgagtatgggatagtaactggt
aacagaacccagaatttattccctgctggtgagcctgtaggcgtgttagctgcaaccgct
atgtcaaatcctgcatacaaggcagttcttgatgctacccctagcagcaattcttcatgg
gagttgatgaaggaaatactactatgcaaggtcagttttaagaatgaagcaattgaccgc
cgcgtaatcttgtacctgaatgactgctgttgtgggaagaagtattgccaagaaaatgca
gcatattcggtgaagaaccagctgagaaaagtcagtcttaaagacactgcaacacagttc
ctgattgaatataaaacagaacgaactgtctcggaaagtgatgcaggccttgttggtcat
attcatctgaatgagatgttgttaaaggagttcaatgtcagtatggctgatgtagtaata
aaatgtcaagaaacattgaagtcatttcataagaagaaaaaagttggtcatgtttttaga
aggacagttttgtttttcagtgaatgctgctcttatcagcagtcttgtgtgccatgttta
atgttcttttggaaggatggaagtgatatcactctagagagaatttcaaatatcctttca
gacatgattttcccagttctgctcgaaacaattatcaaaggtgaccctcgaatttcctca
gcaagtataatttggattaatccggatacaaccacttggattaggaacccctacaggtct
ccaaagggtgaacttgcactggatgtcattcttgaaaaggcagctgtaaatcaaaatgga
gatgcatggaggattgtgattgactcctgtcttcctgtacttcatttaattgacaccagg
cgttccatcccatatgcgataaagcaaattcaggaattgctgggggtttcatgtgctttt
gatcaagcagttcagcgcctttcaacatctgtgacaatggtggccaaaggtgttctcaaa
gagcatctcattctattggccaacagcatgacatgtgccggaaatttggttggatttaat
actggtgggtataaagcactgtctcgttcattaaatgtccaagtccccttcacagaagct
acactctttacacctagaaaatgctttgagcgtgcagctgagaaatgccatatggactct
ctatccagtatagttggatcttgttcctggggtaaacatgtagcagttggtacaggatca
aaatttgaactcctatgggacaccaaagaggtggggttaaatcaggatagtggaacagat
gtttacacttttctgcatatggtgaaaagcactgttggtgaagaagaatcaaatactgcc
tgtttaggtatggaaattgatgatcttgtccttgaggaagattgggcaatgtccccggag
catagttctggttttgataggcctgtctttgaagacaacattgagcttatgaatagtcca
gaaaccaatcctggagaatcaacttgggaaaaggtttcatctttgagtaataattctagt
aaatcggaatggactgctgacagaagtatggaggataatactacaaaggatactgtttgg
tctagttggtcaacggataaaacaagaaaagatgtccttcctgctatgtctgagaaagat
tcttctaggtccaatggttgggatgctctggctactcctcgtggagaagtggaagatgct
gataagaataattatgcaaggaacaaactggaaaagtcaaatgcatggtcaagttgggcg
acagataaaactaaaacacaagacatgtggtctaatagtgccccaaaagattgttccaga
tcagataaatggaatgcagcaactgaaaaggctttgtctgttcagaaggatcaagctatc
acaccagaggctgcccaagagaattctggaaaggaaaatatttggtctcgttgggatgta
aataaaggtgaatcagaaaattcttccatatctggtgggtggaatgctgctactgaaaat
gcttggtctgttcagaatgatcaagctgtgacaccggatgcttcccaagagaattatgga
aagaaaaatatttggtctgtaaataaaggtgaatcagaaaattcttcaagatctggtggg
tggaatgctgcaactgcagcaactgaaaatgtttggcctgttcagaaaaatcaaaatgtg
acagcagatgttgttgctgggcaaaaagctggaatgaaaaatgtttcatctggctgggat
ataaatagaggtgaatccgaaaattcttccaggtccaatagttggaacaattgggtaaag
aatgctgatgatgctggtggatctggatttagtatgcccgatgcagtgcaagaggcttct
gattgggatgagaaggtttctaagaaaaccgaaatccagtcaacaactggttggggttct
tcagttgctggagacttgactacagatgagcatccatcccataccatcaatagctcttgg
aggaaacaaaggtaccaggaaaatcaaggaggttgggattcacaaaatggtggatgcaat
tctgaaagtgagaaaggtcattcatggggatggaatggtagagaatcatccaagaaaaat
cattctgaaggtgcacgaggttggggttcaaatgctggagagaggaaatttaagaacaac
cctgcttctggtgtggcaaatcaagactccagtatgagtgggatatatactgcaacaaga
cagcgattggatgtatttacttctgaggaacaagacattctcacagccatcgaacccgtc
atgcagtctattcgacgaattatgcatcaatctgggtacaatgacggggatccactggca
gcagaagatcagtcttttgtattagaaaatgtctttaaataccatccagataaagcaacg
aaaatgggtcctggaatagaccatgtcatggttagcaggcacagcagtttcctggaaagc
aggtgcttctacattgttttaactgatggctggaaagaagacttctcttaccgcaagtgc
ctggataacttcatcagggaaaagtatccagacattgccgaaacattcactgctaaatat
ttcaggaagcctcgagctggaggaaaccgtgaacgaaaccccactccagaggaaaccaag
agttag

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