Quillaja saponaria (soapbark tree): O6P43_001554
Help
Entry
O6P43_001554 CDS
T09778
Name
(GenBank) Transcription elongation factor SPT6-like protein
KO
K11292
transcription elongation factor SPT6
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_001554
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_001554
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
O6P43_001554
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
O6P43_001554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Tex_central_region
HHH_9
HTH_44
Spt6_S1
S1
Tex_YqgF
Tex_N
B
Motif
Other DBs
NCBI-ProteinID:
KAJ7982426
UniProt:
A0AAD7QL17
LinkDB
All DBs
Position
1
Genome browser
AA seq
1478 aa
AA seq
DB search
MGRRKLVLDEEEEGRIKMNGKNKGKKKEEPVLVDSDEEEEEDEADLDEYENDGFIVDDEE
EDGGSEDKQKKKKKKKRKSFKNIVLDDDDLELLEENKFYGFNQGKMGDGKFKRLKKASEV
TELPEHFSDNEESLFNDIAEDEYKSDAEEDDMADFIVDEEEIYGMGGPVRRELNQVKNSS
YLRKESRRGFANANELPEQPTEVLAESKKLDESTQFDSLIQINAFLGEKGHYIEDTDIPE
RMQIFEESVGPAPVDNMSLEEESSWILSQLAENLYPLFSEKIDKEDPNFLRPLNRINKED
IVRFLELHRLKKYDIPFISMYRKEQCLSLLEDPEQNEAENIYKDDAEGTPKLKCHKVLWA
IKELDRKWLLLQKRKSALLMYFNKRFAEESQSSFCDPKASVNKQIFKSITKALEKAESER
EIDDANMKFNLHFPPAEELGDSMYKRHVKKSHYNICTEAGLRLLVDKFGNPEQFGLQVTL
ENSGMEFHEDPNESPENIASEFMSDRFETSEDVLKGARHMAAVEISSEASFRKHVRNIFM
DKALVSTSPTPEGDIVIDSFHQYSGVKWLWEKPLLKFEDAQWLLIQKAEEEKLLQVIVKL
PDSTLNELKSVCADVYLRAEGRSSQLWNEQRRLILHDAISNFLLPSVEKEARELLTTKAK
NWLLMEYGKQLWNRVSVAPYQCNGNVSKENGFTQRVMACCWGPGKPETTFVMLDSSGKLL
DVLHAGSLTLWLRNMNDQQRKKSDQQRILRFLSNYQPKVIVLGAANVMCTRLKDDINEII
SMMVEENLPDVSQQMNKVRVVFGDECLPNIYEHSQVSSDQLPRQPDIVKRAVALGRFLQN
PLAMVATLCGVQKEILSWQLSPLQQFLTSDEKFEMIEWVMVDVTNQVGVDLSKAVSHDWL
FAPLQFVSGLGPRKAALLHKESLGDIAVRNRRELTAYGLKTEKIFYNAVGFLRVCFNDPF
STDSDTDVLDGTRIHPESYAVAKELAEAVYRYNHKENANIDVSLVNAIAYIQENPILLQS
FDINAYADTLQIERGEYGRETIYDIKNELVHGFIDPRRPYVEPTQDEEFDMISGKTGDAP
LEGKRVEAIVRHVQSQRAFCVLGSGLTGILLKDDFSDEIDDISLSDKMHQGDKLACKIKE
IEKNRYRVTLTCKASELKSGEQVHFHKLDPYYQKGQVILPSQPEKSYKDELANNHFKPRM
ISHPCFWNITAYQANEFLADKDIGEYIFHPSSRGPCYLTFTLKISDGLSVHKDIVEIGKD
MLDMASLLRLGKTLKLGDERFEDIDEVMRNYINPLVVHLKTMLNFQKFKKGSKSEVDELL
KAEKAEYPMRIAYGFGISYEHPGTCILSYIRSTNPHHEFVGIHPKGFKFRKQMFEKIEHM
VSYFQKHINDPIVPPRDSRIGGSIGTSMAGDWRSNKVDQQGQSHSGKNDREDGWGQGRGR
GRGRGQGRAPDCGTSDEGGYNGRYQNKDDSLYYWFKVG
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagaaaattggttttggatgaagaagaagaagggagaatcaaaatgaatggg
aaaaataaaggtaaaaaaaaggaagaacctgttcttgtggacagcgacgaggaagaagaa
gaagatgaggcagatttggatgagtatgaaaatgatgggtttatagttgatgatgaagaa
gaagatggaggttcagaagacaagcaaaagaagaagaaaaagaaaaagcggaaatcgttt
aaaaatattgttcttgatgatgatgatcttgagttgcttgaagaaaacaaattctatggt
ttcaatcaaggaaaaatgggtgatggaaagtttaagcggctcaaaaaggctagtgaagtc
actgagctaccagagcatttttctgataatgaagaatcacttttcaatgatattgctgaa
gatgagtacaaatctgatgctgaagaggatgacatggctgattttatagtggatgaagaa
gaaatctatggaatgggaggccctgtcagaagggagctaaatcaagtaaaaaactcctca
tacttaagaaaagaatctagacgtggttttgccaatgccaatgaactgccagagcagcct
actgaagttctagctgagtccaagaaacttgacgagtctacccagtttgattcattaatc
cagataaatgcattcttgggtgaaaagggtcactacatagaagatactgatataccagag
aggatgcagatatttgaggaatctgtggggcctgctccagttgacaacatgagtttagaa
gaagagagctcttggatacttagtcaacttgcagaaaacctatatcctttattctctgaa
aagatagacaaagaagatcctaattttctcaggccacttaatagaattaacaaagaagac
attgtgaggttcttggagttgcatcgtttgaagaagtatgatattccttttatttctatg
tatcggaaggagcaatgtcttagcctcttggaggatcctgagcagaatgaagcagaaaac
atatataaggatgatgcagagggaacacctaagttaaagtgtcacaaggtgctttgggct
atcaaggaactggacagaaagtggttgcttcttcagaagcgaaagagtgctcttctgatg
tactttaataagcgttttgcagaagaaagtcaaagtagtttctgtgatccaaaagccagt
gtgaataagcagatctttaaatccatcactaaggcgctcgagaaggctgaatcagagaga
gagattgatgatgcaaacatgaagtttaatttgcactttcctccagctgaagagctagga
gatagtatgtataagagacatgtgaaaaagtcacattacaacatttgcaccgaggcagga
ttgaggttgcttgtggacaagtttggcaaccctgagcaatttgggttgcaagtcactctt
gagaattcgggcatggagtttcatgaggatcccaatgaatctcccgagaatatagcttca
gaatttatgtctgataggtttgaaacttcagaagatgtacttaaaggtgccaggcatatg
gctgcggtggagatcagcagtgaggcatctttcaggaaacacgtccgcaatattttcatg
gataaagctttagtctccacaagccctaccccagaaggagacatagtaattgattctttc
caccagtattcaggtgttaagtggctatgggaaaaaccgttgttgaagtttgaggatgct
cagtggcttctaattcaaaaggctgaagaagagaagctccttcaagttatagtaaaattg
cctgatagtaccctcaatgagttgaaaagtgtctgcgctgatgtttatctcagagctgaa
ggtagatcttcccagctttggaacgagcagcgtagactaatactacatgatgctatttct
aactttcttctcccctctgtggagaaggaagcacgtgagctgttgaccaccaaggcaaaa
aactggctactaatggaatatgggaagcaattgtggaacagggtctctgtggcaccctat
cagtgcaatggaaatgtttcaaaagagaatggtttcacacaaagagtcatggcgtgttgt
tggggacctggaaaaccggaaaccacctttgtaatgctcgattcatcaggaaaattgctt
gatgtattgcatgctgggtcccttactctatggttgaggaatatgaatgatcagcaacgt
aagaaaagtgaccaacaacgtatccttaggttcctttcaaattatcaaccaaaggttatt
gtcctgggagctgctaatgttatgtgtacacgtttgaaggatgatattaatgagattatt
tctatgatggtagaggaaaatctgccagatgtaagtcaacagatgaataaagtacgagtt
gtttttggggatgaatgtttgcccaacatttatgaacattcacaggtttcctcagaccag
cttcccagacagccagacatagtgaaacgggctgtggctctaggacgtttcctccaaaac
ccattggctatggttgcaacactgtgtggggtccaaaaagagattctctcttggcagcta
agccccttgcagcagtttcttacgtctgatgagaagtttgagatgatagaatgggtgatg
gtggatgttacaaaccaagttggtgtagacttaagcaaggctgtaagccatgattggctt
tttgctcctttgcaatttgtttctggtctaggacctagaaaggctgctcttttacataaa
gagtcacttggagatatagctgtgagaaatagaagggaattgactgcttatggattgaaa
actgagaagattttctacaatgcggttggctttttacgtgtttgtttcaatgatcctttt
tctactgacagcgatactgatgttttggacggtacaagaattcatccagaatcatatgcc
gtcgccaaagaattggctgaggcagtttatagatataaccacaaggaaaatgcaaatatt
gatgtttccctagtaaatgcgattgcatatattcaagagaatccaattttgctacaaagt
tttgatataaacgcttatgcggatacactacagatagaaagaggagaatatggaagagag
actatttatgatataaaaaatgaactggttcatggatttattgatcctcggaggccttat
gtagaacccactcaggatgaggagtttgatatgatatctgggaaaactggggatgcacct
cttgaaggaaaaagagttgaggcaattgttcgccatgtacagtcccaacgcgctttctgt
gtacttggctcaggattgactgggattctgttaaaggatgatttttcagatgaaattgat
gatatttctttatcagacaagatgcatcaaggtgacaagcttgcctgtaagatcaaagaa
atagaaaaaaatagataccgggtgactctgacttgtaaagcaagtgagttgaagagcggt
gaacaagtacatttccataaactggatccttattatcaaaagggacaggtcatcttacca
agtcaacctgagaaatcctacaaggacgagcttgcaaataaccatttcaagcctaggatg
atatctcatccctgtttttggaatataacggcataccaggcaaatgagttcctcgcagat
aaggatattggtgaatatatttttcacccaagttcacgaggtccatgttatttgactttc
actctgaaaatttctgatggactttctgtacacaaagacatcgttgaaattggaaaggat
atgttggacatggcaagtttgcttcgtctaggaaaaactctaaaattaggagatgaaaga
tttgaggatatagatgaggttatgagaaactatatcaatccattggtagtccatctgaaa
acaatgctcaatttccaaaagttcaagaagggttcaaaatctgaggttgatgaattgtta
aaagctgagaaggcagaatacccaatgaggatagcttatggttttggaatttcgtatgag
catcctggcacctgcatcctgtcttatattagaagtacaaaccctcatcacgagtttgtt
ggcattcatcctaagggattcaagtttcggaagcaaatgtttgagaaaattgagcacatg
gtgtcatatttccagaagcatatcaatgacccaatagtaccaccaagagactccagaata
gggggatctattgggacttctatggctggagattggagaagcaacaaggttgatcagcaa
gggcagtcccattcaggaaaaaatgatcgtgaagatggttggggacagggacgtggacgt
ggacgtggccgtggacaaggacgtgcacctgattgtggcacttctgacgaggggggttat
aatggccgctaccaaaacaaagatgacagtttatattactggttcaaagtggggtga
DBGET
integrated database retrieval system
