Quillaja saponaria (soapbark tree): O6P43_001602
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Entry
O6P43_001602 CDS
T09778
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_001602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_001602
03012 Translation factors [BR:
qsa03012
]
O6P43_001602
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O6P43_001602
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
O6P43_001602
Translation factors [BR:
qsa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
O6P43_001602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
dsrm
HA2_N
AAA_22
AAA_19
T2SSE
ATPase
nSTAND3
AAA_16
AAA_23
PhoH
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
KAJ7982481
UniProt:
A0AAD7QJ50
LinkDB
All DBs
Position
1
Genome browser
AA seq
1046 aa
AA seq
DB search
MLLQSEKDQEIVSRDRKDRRDYEQISNLAKRMGIYSEMYGKVVVASKVPLPNYRPDLDDK
RPQREVVIPLSLQRRVEGLLQEHLDRLLLSSGKVTDSSDDASSVDQGKDVHMDENADSFV
DGSVMEKVLQKRSLRMRNMQRAWQESPEGNKMLEFRKSLPSFKEKERLLQAIVRNQVIVI
SGETGCGKTTQLPQYVLESEIESGRGAFCSIICTQPRRISAMAVAERVSAEKGEPLGETI
GYKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLDGITHVFVDEIHERGMNEGFCYFQTS
LLIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGAAPTFHIPGFTYPVRAHFLEDILEMT
GYKLTSFNQIDDYGQEKLWKTQRQLVPRKRKNQITSLVEDALSGSNFENYSSRARDSLAC
WAPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCLRDQLKANPLVGDPNRVLILT
CHGSMATSEQRLIFERPPPNIRKVVLATNMAEASITINDVVFVIDCGKAKETTYDALNNT
PCLLPSWISQASARQASILVAVSLICVGVGLADVQPGECYHLYPRCVYGAFAEYQLPELL
RTPLNSLCLQIKSLQVESIGEFLSAALQAPEPRAVQNAIGFLKMIGALDENENVTNLGKF
LSMVPVDPKLGKMLIMGAILRCFDPVLTVVAGLSVRDPFLLPQDKKDLAGTAKSRFSAKD
YSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFAFILKDAGLVDPD
AGINNKLSHNQSLVRGVICSGLFPGISSVVHRETSMSFKTMDDGQVLLYANSVNARYQTI
PYPWLVFGEKVKVNSVFIRDSTGVSDSILILFGGALSHGVQAGHLKMLEGYIDFFMDPSL
AESLVKLKEELDKLLQQKLEDPSLDIHKEGKYLMLAVQELVTGDQCEGRFVFGRESKRPK
ESSDNSKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKK
NKQLAERDAAVEALAWLTHTSDNYKG
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgcagagtgaaaaggaccaagagattgtatctagagatcgaaaagataggaga
gattatgagcaaatttctaaccttgccaagagaatggggatttacagtgaaatgtatgga
aaagtggtggttgcaagcaaggtgcctcttcctaactacaggccagatttggatgataag
cggccacaaagagaggtggtaattccattaagcttgcaaaggagggttgaaggtttattg
caggaacaccttgatcgcctcctattaagttctggaaaggtcactgatagttctgatgat
gccagttctgttgatcagggcaaagatgtacatatggatgaaaatgccgattcttttgta
gatgggtctgttatggaaaaggttctccagaagaggagtttgaggatgcgcaacatgcaa
agggcttggcaggaatcacctgaaggcaataagatgctggaatttcgaaaatctttacca
tcattcaaggagaaggaacggctactccaagctatagttcgaaatcaggtgatagtaata
tctggagagactggatgcggtaagaccactcaacttcctcaatatgtattagagtcagaa
atagaatctggtcgtggagcattctgcagcattatttgtactcagcctcgaagaatatct
gctatggctgtggcagaaagagtgtctgcagagaaaggagaacctcttggtgaaacaatt
ggatacaaagttcgtttagagggaatgaaaggaaaaaatacccatcttcttttctgtact
agtggtatactactacgacggctgctaagtgatcgtaacctcgatggtataacccatgtt
tttgttgatgaaattcatgagcgtggtatgaatgaaggtttttgttattttcagacttcc
ttactgattgtgttgaaagatcttcttccacgtcgtcgggatttaaggttggttctaatg
agtgccactctgaatgctgagctattctctaattattttggagctgcaccgacatttcac
attccgggttttacatatcctgtgagagcccactttttagaagacattttggaaatgacc
ggatataagttgacatccttcaatcaaattgatgactatggccaagagaagttgtggaaa
acacaaaggcaactagtgcctagaaaaaggaaaaaccagatcacttctctagttgaggat
gctctttctggatcaaactttgagaattatagctccagggcacgtgattctctagcatgt
tgggcacctgattgcataggatttaatctcattgaggctgttctatgccatatatgtcgg
aaagaaaggccaggtgccgttttagtgttcatgactgggtgggaggatattagctgtttg
agggatcaacttaaagctaatcctcttgtaggagatcctaacagagttctgattctaact
tgccatggttctatggcgacctctgaacagagactcatctttgagagaccacctccaaat
attcgcaaagtagtacttgctacaaatatggcagaggcaagcattacaatcaatgatgtg
gtttttgtaatcgattgtggaaaggcaaaggaaacaacttatgatgctctcaataacaca
ccttgcttactaccgtcttggatatctcaagcatctgcacggcaggcaagtatccttgtt
gctgtctctttgatttgtgtaggggtagggctggccgatgtgcagccaggtgaatgctac
cacctttaccccagatgtgtttatggagcttttgctgaatatcaacttcccgaactgttg
agaactcccttgaattctctctgcttgcaaataaagagtttgcaggttgagagcataggt
gagttcttatcagctgctttgcaggcgccagaaccacgtgcagtccaaaatgccattggc
tttctgaagatgattggggcactagatgaaaatgaaaatgtaacaaatcttggaaagttt
ctgtcaatggttccagtagaccccaagttagggaaaatgctgataatgggtgctatactt
cgttgctttgatcctgttcttaccgtagttgctgggcttagcgtcagggacccttttctt
ttgcctcaagacaagaaggatttagctgggacagcaaaatctagattttctgcaaaagat
tacagtgatcatatggctcttgttcgtgcatatgaaggatggaaagatgcagaaagagaa
ggatctgcctatgagtactgttggagaaatttcctctctgcccaaacccttcaggctatc
cattctcttcggaagcagtttgcctttattctaaaagatgctggcttagtagatccagat
gcaggcattaacaataaattgagtcataatcagtcactggttcgtggagtcatatgttct
ggcctctttcctggcatatcatcagtagtgcacagagagacgtccatgtcatttaaaaca
atggatgatggccaggttttactatatgcaaactcagtgaatgcacgttaccagaccatt
ccttatccatggctggtctttggggaaaaagtcaaggtcaactctgttttcatacgtgat
tccactggcgtatctgattcaatactgatcctttttggtggtgctctaagccatggagta
caggctgggcatttgaaaatgttggaagggtatattgacttcttcatggatcctagtttg
gcagagtcccttgtgaagcttaaggaagagcttgataagcttctccaacagaagcttgaa
gatccaagccttgacattcacaaggaaggaaagtatttgatgcttgctgttcaagagttg
gttacgggtgaccaatgtgaagggagattcgtatttggccgtgaaagcaagagacctaag
gaatccagtgataatagtaaatttacaaaagatgggacaaatccaaagagcttattgcaa
acactactgatgcgagcggggcactccccaccaaaatacaaaacaaaacacctgaaaact
aatgaatttagggcactggtagagttcaaagggatgcaatttgttggaaaaccaaagaaa
aacaagcagcttgcagagagagatgctgctgtagaggctttggcctggttaactcacacc
tctgataattataaagggtga
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