Quillaja saponaria (soapbark tree): O6P43_002421
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Entry
O6P43_002421 CDS
T09778
Name
(GenBank) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_002421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_002421
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_002421
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Ortholog
Paralog
GFIT
Motif
Pfam:
CNOT10_TPR
TPR_2
TPR_14
TPR_1
CFAP70_TPR_C
TPR_8
TPR_12
TPR_19
ARM_TT21
SRP_TPR_like
DUF627
ALP_N
Coatomer_E
Motif
Other DBs
NCBI-ProteinID:
KAJ7978971
UniProt:
A0AAD7QCI5
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All DBs
Position
2:6292016..6304531
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AA seq
763 aa
AA seq
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MEGRDLSSTAALAAVANRDGSTAIDGDDGVFSVTVSLAKEAALHFQSGKFSECVEVLNQL
LLKKQDDPKVLHNIAIAEYFRGGCSDPKKLLDVLNKVKKKSDELAQASGEQELNGAGNKV
ALGSKGNNTSTHQFSVSNSASVVYTDEFDSSMAILNIAVIWYHLHEYAKTITVLEPLFQN
IEPIDESTALQICLLLLDAGLAWHGASKSADVLTYLEKAFGISCASQGDNGSTGMQQSTN
LIAKSSSVPGSTSVTDASSSDLTVSGNASDNPLSRTLSEETLDYEAMLLDIGGQNLVRPT
GPSSNDASKTPVDRSFSNVELKLKLQLYRVRFLLLVRNLKLAKRELKLAMNIARGRDSSM
ALLLKSQLEYARGNHRKAIKLLMASSNRTDKAFSIVFNNNLGCIYYQLGKYQTSSFFFSK
ALTNCSLLRKDKPLKLSTFSQDSSLLIIYNCGVQYLASGKPILAARCFQKASLVFHKRPL
LWLRLAECCLMALEKGLLTSNQAPSEKLEVRVHVVGKGKWRQLVMEDGIPRNGQSDTFER
DDCSLSIDARQKLSMSLARQCLANALHLLGSYSSISLKFGLPSNFSLEDSDRSEVTSLKN
SDHISLNSIDSKAFSVAVCLGQANSNGDTKEQKGGASQELIHNSLSYYEDICLKENLLMK
QAALANLAYVELELENPAKALAAARSLLELPDCSRIYTFLGHVYAAEALCLLNRPREAAD
HLSIYLSGGNNVELPFSQEDCEKWQVERTADFEELNGGSLTVQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcgagatttatcatcgacggctgcccttgcagctgttgccaatcgggatggg
tctacggctatagatggcgatgatggcgttttctcagtcactgtttcgctggccaaagaa
gctgctttgcattttcagtcgggaaagttctctgagtgtgtcgaggtcttgaaccagctg
ttgctgaagaaacaagacgatcccaaggttcttcataacattgcaattgccgagtacttt
cggggtggctgttcagatccgaaaaagttgcttgatgtccttaataaagtcaagaaaaaa
agtgacgagcttgctcaggcttctggagaacaagagcttaacggtgctggaaataaagtt
gccttggggtctaaaggaaataatacttcgacacatcagttttctgtttcaaatagtgcc
tctgtagtatacacagatgagtttgactcctctatggcgattctaaacattgccgttatc
tggtaccatcttcacgaatatgcgaagacaataacagttttagaaccactctttcaaaat
attgaacccatagatgagtcgacagctcttcaaatttgcctcttgttactggatgcgggg
cttgcttggcatggtgcatcaaaatcagctgatgttttgacttatctggaaaaggcattc
ggcattagttgcgctagtcaaggtgacaatggaagtacagggatgcaacaatctacaaac
ctaattgcaaaatcttcctctgtcccaggcagtacttcagttactgatgcatccagttca
gatttaactgttagtgggaatgcctcagataatcctctatccagaactttatctgaagag
acgcttgattatgaagccatgttactggatattggtggacaaaatttagtgaggccaact
ggtccatcttcaaatgatgcttcaaaaaccccagttgataggtctttttctaatgttgag
ttaaagcttaagttgcaactttacagggttcggttcctgcttcttgttaggaacctgaag
ctcgcaaaacgtgaactcaagcttgctatgaacattgcacgtggaagagattcgtccatg
gctcttcttttgaagtctcagcttgaatatgcccgtggaaaccaccgtaaggcaattaag
ctgttgatggcatcaagtaatcggacagacaaagcattttcaatcgttttcaacaacaat
cttgggtgcatctattaccagcttgggaaataccagacatcatcatttttcttttcaaag
gcattgactaattgttcattacttaggaaggacaagccgctaaagctatctactttttcg
caggacagttctctccttataatttataattgtggtgttcagtacttggcttctgggaag
cctattcttgctgctcgctgcttccaaaaagctagtttggtttttcataagcggccttta
ttgtggctccgacttgcagaatgctgtttgatggctttggaaaagggcctacttacatcc
aatcaagcaccatcagaaaagttagaagttagagtccatgttgtcggcaagggaaaatgg
aggcaacttgtgatggaagacggaattccaagaaatggacaatcagatacatttgaaaga
gatgattgttctctgagcattgatgcgcggcagaaactttcaatgtcacttgccaggcag
tgccttgcaaatgcccttcatttactgggttcatacagttcaatatctttgaagtttggt
ttgccatcaaatttttccttggaggacagtgatcgaagtgaagtgacatctttaaagaat
tcagaccatattagcttgaacagcattgattccaaggcattctctgtagcagtatgttta
ggccaggctaattcaaatggggacacaaaagaacaaaagggaggggcaagtcaggagctc
atacataactctctctcctattatgaagatatctgtctaaaagaaaatctattgatgaag
caggctgctcttgcaaatctggcttatgtcgagttggaattggaaaatcccgccaaggca
ctggcagctgcaaggtctcttttagaacttccagattgttcccgaatttacacatttctt
ggtcatgtttatgctgccgaggctctatgcttgctaaacaggccaagagaagctgctgat
catttgtcaatctatctgtcaggagggaataatgttgagttgccatttagccaagaggac
tgtgagaaatggcaagtcgagaggactgctgattttgaggagttaaatggaggatcattg
acagtccaataa
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