Quillaja saponaria (soapbark tree): O6P43_002947
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Entry
O6P43_002947 CDS
T09778
Name
(GenBank) cell differentiation protein RCD1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_002947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_002947
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_002947
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
CD_NTase_C
Motif
Other DBs
NCBI-ProteinID:
KAJ7979559
UniProt:
A0AAD7QDY2
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All DBs
Position
2
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AA seq
343 aa
AA seq
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MADNEDMQEIDNFWEDAWEEITLDFLDSKIDQDFAVQNCRKSERKKHKNRRMNKATEIPN
LILQFQEENCRESALRKLSTFLLEKREEDPDNYYWTAHILYNSCGTMTILLQELLTFSRM
MVDGNLTRRASKRLINVLTLFQCIAADKVTRHSFVKSSVPSFLVPLILFKAPMEEFENVR
AVALSVIGILCQARESDIIQWAVENNMVEVCRISIEIGNELCKVIGMHIIEAIMQDDSGL
SHICNSMCNHLLEELTATWYSLVTFLTVDQDYSPRLLFHIIRCYILLCDNVGGYNVVKGS
LPEPIINGSFHDIRERFPLIESLIQQLLLTVGKIDRSIPASPH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacgaagatatgcaagaaattgacaatttttgggaagatgcatgggaggaa
ataacccttgattttctcgactcgaagatcgaccaagattttgcagttcagaactgtcga
aaatctgaacgcaagaaacataagaatcggcgaatgaataaagcaacggaaatacctaac
ttgatactccaatttcaggaggaaaattgcagagaatctgctctaagaaaactcagcact
ttccttctcgagaaaagggaggaggatccagataattactactggactgcacatatattg
tacaattcttgcggcacaatgactatcttgctacaggagttgttgacattttcaagaatg
atggttgatggaaatctaactagaagagcatccaagcgtctgatcaatgttctcaccctg
tttcagtgcattgctgctgacaaagtgacccggcatagtttcgttaaatcttcagtcccc
agttttcttgttccactgatactgtttaaggctcccatggaggaatttgagaatgttcga
gctgttgcactttctgtgataggcattctatgtcaggctagagaatctgacataattcaa
tgggctgtcgaaaataatatggtcgaagtttgccgaatcagcattgagattggaaatgaa
ctctgcaaagtgataggaatgcacataattgaagccataatgcaagatgattcaggatta
tcccacatctgtaattcaatgtgtaatcatctgcttgaggaattgacagcaacatggtat
tctctggttacatttttgactgtggatcaagactactctcctcgactcctatttcatata
atacgatgctacattctgctatgtgataatgttgggggatataatgttgtcaaagggagc
ctacctgaacccattataaatggttctttccacgatatcagagagaggttccctctaatt
gaaagtttgattcaacaacttctgctgacagttggtaagatcgatagaagcattccagct
tctccacactag
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