Quillaja saponaria (soapbark tree): O6P43_003264
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Entry
O6P43_003264 CDS
T09778
Name
(GenBank) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
O6P43_003264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_003264
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
O6P43_003264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
Ribonuc_P_40
Motif
Other DBs
NCBI-ProteinID:
KAJ7979921
UniProt:
A0AAD7QFJ2
LinkDB
All DBs
Position
2
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AA seq
260 aa
AA seq
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MDIKRHTCLKLQISGTHEPEETEPIFIKGTWYETNFDLSITDGLHAWICHASEEDVRDRA
AQWDQPVSKYVELAERYLGFQQPGSLYGFSDAGDGYKRLSWTFEKQGTKLEWRWKCQPAP
NTKKTTSEMLDFLMDANIRLSEEVVSKTQSFEKMKVEAEKCLAQSEKITNEKMEFESEIY
GKFLGVLNSKKAKLRELQDQLSKQEKVGKFPQDGEDTDKTESFDQESNDDKSAEESENLT
GTSKDVSASNPSGRKRLRHK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggacataaagagacacacatgtttaaagctccagatttctggcacccacgaaccggaa
gagactgaacccatattcatcaaaggaacatggtacgagaccaactttgacctttccata
acagatggtctccatgcctggatttgccatgcatcggaagaggatgttagggatcgagca
gctcagtgggaccagccggtctcaaaatatgtagagttagctgagcggtacttggggttt
cagcaacctgggtctctgtatgggttctctgatgcgggagatgggtataaaagattgtca
tggacatttgagaagcaaggaactaagctagaatggagatggaaatgtcagccagctcca
aatactaagaaaactacctcagaaatgttggactttctcatggatgcaaacataaggcta
agcgaagaagttgtaagtaaaacacaatcatttgagaagatgaaagtggaagccgaaaag
tgtttagcgcagagtgagaagattaccaatgagaagatggaatttgaatctgaaatctat
ggaaagtttcttggggtcttgaattctaagaaagcaaaactcagagagcttcaagatcaa
ctttcaaaacaagaaaaggttgggaaatttccccaagacggggaggacacagacaaaact
gaaagttttgatcaggaaagtaatgatgataaaagtgccgaagaatctgagaatcttaca
ggcacttcaaaggatgtttctgcaagtaatccttctggtcgaaagagactgagacacaag
taa
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