KEGG   Quillaja saponaria (soapbark tree): O6P43_003285
Entry
O6P43_003285      CDS       T09778                                 
Name
(GenBank) Pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_003285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsa03041]
    O6P43_003285
Spliceosome [BR:qsa03041]
 Complex C
  Other components
   Step II factors
    O6P43_003285
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_MABP1-WDR62_1st eIF2A WD_LRWD1 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_Vps41
Other DBs
NCBI-ProteinID: KAJ7979944
UniProt: A0AAD7VLL7
LinkDB
Position
2
AA seq 593 aa
MDLLQSYGNRNDDDLDEPENQGEIPNLDENSSPDSSPPRLLPAKSAAPKVDDTMLALTVA
QGNRTLSKPIDPVQHAVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDAAIE
PFVFDEQYNTFYKYGYAADPSASAGYNYVGDLEALQKNDGISVYNIPQHEQKRRKLEKKK
GLEEDEDAGGDLDKVEIENPATDTWLLKNKKSPWSGKKDGRQAELTEEQKKYAEEYAKKK
GDERSGFGGDKGEAVQDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVQTWSG
HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIWFCNDGTK
FLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVRLNPDEDKQNVLLAGMSDKKIVQWDMN
TGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS
ISLHPNSNWLAAQSLDNQILIYSTREKFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSG
DGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggatcttctccagtcgtacgggaatcgaaacgacgacgatttggatgaaccagaaaac
cagggtgaaatccctaatttagatgaaaattcttcaccagattcatccccacctcgcctc
ctcccagccaaatccgccgccccgaaagtcgacgacaccatgctcgcccttacggtagct
caagggaaccgaaccctatctaaacctattgatcctgtccagcatgccgtcgcattcaat
cccacctacgaccagctttgggctccaatctatggtccctcccacccgtatgctaaggat
ggcatagcacaaggaatgcgcaatcataagctaggtttcgttgaggatgcagctattgag
ccatttgtcttcgacgagcagtacaacactttctacaagtatggctatgctgctgaccct
tcggcttctgctgggtacaattatgttggcgatttggaagctttgcaaaagaatgatggg
atttcggtgtacaacataccgcaacatgaacagaagaggaggaagctggagaagaagaaa
ggcttagaggaagatgaagacgcgggtggagaccttgataaggtagaaattgaaaatcca
gctactgacacatggttgctgaagaacaagaagagtccatggtccggtaagaaggatggg
aggcaggcagaattgacagaggagcaaaagaagtatgctgaagagtatgctaagaagaag
ggagacgaaagaagtggttttggtggggacaaaggagaggctgtccaagataagagcact
tttcatggaaaggaagaaagagattatcaaggaaggtcttggattgcacccccgaaggac
gcaaaggccacgaatgatcattgttatatacccaagaggctggttcaaacctggagtggg
cacacgaagggtgtatctgcaattcgattcttcccaaaatacgggcatttgatactttca
gcaggaatggatacaaaggtgaagatttgggatgtgttcaattcaggtaaatgtatgaga
acttacatgggtcattcaaaagctgtacgtgatatttggttttgtaatgacggcaccaag
tttttgactgccggttatgataagaatattaagtattgggatacagaaactgggcaagtg
atttcaactttctcaactgggaagatcccttatgtagttaggcttaatccagatgaggat
aagcagaatgttttattggcaggcatgagtgataaaaagattgttcagtgggacatgaat
acagggcagataacgcaagagtatgatcaacatttgggcgctgttaacaccattacattt
gttgacaataacagaagatttgtaacttcaagtgatgacaagtctctccgtgtatgggaa
tttggtattcctgtggttataaagtatattagtgagcctcacatgcactctatgccatct
atttctcttcatccaaattcaaattggcttgctgcccagagtttggacaatcagatactt
atatacagcactagggagaagtttcagctcaataagaaaaagaggtttgccgggcacatt
gcggctgggtatgcctgccaggtcaatttctcaccagatggacgatttgtcatgtctgga
gacggagaagggaagtgttggttctgggattggaagagttgtaaagtttttagaactctc
aagtgtcatgaaggcgtttgcattgggtgtgagtggcatcctttggaacagagtaaggta
gcaacatgtggttgggatggcttgatcaaatactgggactag

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