Quillaja saponaria (soapbark tree): O6P43_003285
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Entry
O6P43_003285 CDS
T09778
Name
(GenBank) Pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_003285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_003285
Spliceosome [BR:
qsa03041
]
Complex C
Other components
Step II factors
O6P43_003285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
eIF2A
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
Motif
Other DBs
NCBI-ProteinID:
KAJ7979944
UniProt:
A0AAD7VLL7
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All DBs
Position
2
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AA seq
593 aa
AA seq
DB search
MDLLQSYGNRNDDDLDEPENQGEIPNLDENSSPDSSPPRLLPAKSAAPKVDDTMLALTVA
QGNRTLSKPIDPVQHAVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDAAIE
PFVFDEQYNTFYKYGYAADPSASAGYNYVGDLEALQKNDGISVYNIPQHEQKRRKLEKKK
GLEEDEDAGGDLDKVEIENPATDTWLLKNKKSPWSGKKDGRQAELTEEQKKYAEEYAKKK
GDERSGFGGDKGEAVQDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVQTWSG
HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIWFCNDGTK
FLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVRLNPDEDKQNVLLAGMSDKKIVQWDMN
TGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS
ISLHPNSNWLAAQSLDNQILIYSTREKFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSG
DGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctccagtcgtacgggaatcgaaacgacgacgatttggatgaaccagaaaac
cagggtgaaatccctaatttagatgaaaattcttcaccagattcatccccacctcgcctc
ctcccagccaaatccgccgccccgaaagtcgacgacaccatgctcgcccttacggtagct
caagggaaccgaaccctatctaaacctattgatcctgtccagcatgccgtcgcattcaat
cccacctacgaccagctttgggctccaatctatggtccctcccacccgtatgctaaggat
ggcatagcacaaggaatgcgcaatcataagctaggtttcgttgaggatgcagctattgag
ccatttgtcttcgacgagcagtacaacactttctacaagtatggctatgctgctgaccct
tcggcttctgctgggtacaattatgttggcgatttggaagctttgcaaaagaatgatggg
atttcggtgtacaacataccgcaacatgaacagaagaggaggaagctggagaagaagaaa
ggcttagaggaagatgaagacgcgggtggagaccttgataaggtagaaattgaaaatcca
gctactgacacatggttgctgaagaacaagaagagtccatggtccggtaagaaggatggg
aggcaggcagaattgacagaggagcaaaagaagtatgctgaagagtatgctaagaagaag
ggagacgaaagaagtggttttggtggggacaaaggagaggctgtccaagataagagcact
tttcatggaaaggaagaaagagattatcaaggaaggtcttggattgcacccccgaaggac
gcaaaggccacgaatgatcattgttatatacccaagaggctggttcaaacctggagtggg
cacacgaagggtgtatctgcaattcgattcttcccaaaatacgggcatttgatactttca
gcaggaatggatacaaaggtgaagatttgggatgtgttcaattcaggtaaatgtatgaga
acttacatgggtcattcaaaagctgtacgtgatatttggttttgtaatgacggcaccaag
tttttgactgccggttatgataagaatattaagtattgggatacagaaactgggcaagtg
atttcaactttctcaactgggaagatcccttatgtagttaggcttaatccagatgaggat
aagcagaatgttttattggcaggcatgagtgataaaaagattgttcagtgggacatgaat
acagggcagataacgcaagagtatgatcaacatttgggcgctgttaacaccattacattt
gttgacaataacagaagatttgtaacttcaagtgatgacaagtctctccgtgtatgggaa
tttggtattcctgtggttataaagtatattagtgagcctcacatgcactctatgccatct
atttctcttcatccaaattcaaattggcttgctgcccagagtttggacaatcagatactt
atatacagcactagggagaagtttcagctcaataagaaaaagaggtttgccgggcacatt
gcggctgggtatgcctgccaggtcaatttctcaccagatggacgatttgtcatgtctgga
gacggagaagggaagtgttggttctgggattggaagagttgtaaagtttttagaactctc
aagtgtcatgaaggcgtttgcattgggtgtgagtggcatcctttggaacagagtaaggta
gcaacatgtggttgggatggcttgatcaaatactgggactag
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