Quillaja saponaria (soapbark tree): O6P43_003817
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Entry
O6P43_003817 CDS
T09778
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_003817
03041 Spliceosome [BR:
qsa03041
]
O6P43_003817
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_003817
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_003817
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
O6P43_003817
mRNA cycle factors
Common to processing body (P body) and stress granule
O6P43_003817
Spliceosome [BR:
qsa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
O6P43_003817
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
O6P43_003817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
NPF
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
KAJ7980558
UniProt:
A0AAD7VLZ7
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All DBs
Position
2
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AA seq
620 aa
AA seq
DB search
MRTSWADLAANSAAENVGSGSSANNGGIVANSAPTRPAYVPPHLRNRPPSSDPSPAPAPA
PAPAYSGPASNTLQGGSRWAAPRNEYRPGYGGGGGRGSGWGNRSGGMDRGREREVNPFGD
DDDTEQPFTEQETTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGDALNDNIRRCKYVK
PTPVQRHAIPISLSGRDLMACAQTGSGKTAAFCFPIIGGIMRGQPVQRPPRGARTAYPLA
LILSPTRELSVQIHEEARKFSYKTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVD
LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEI
QRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVLESDKRSHLMDLLHAQRANGVQGKQAL
TLVFVETKKGADSLEHWLCMNGFPATTIHGDRSQQEREYALRSFKSGNTPILVATDVAAR
GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNASLARALADLMQES
NQEVPAWLSRFAARSSFGGGRNRRSGGGRFGGRDVRRESSFNRGGSDYYGGGNSISGGYG
ASSGGYGGSGYGPGVTSAWD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggcagatttggctgcaaactctgcggctgaaaatgtaggttctggt
tcttctgctaacaatggaggaatagttgccaattcggctcccacacggccagcctatgta
cctccccatcttcgcaaccgtccaccctcttcggatccttctcctgccccagctccagct
ccagctccagcatatagtggccctgcttctaatactttacaaggtggatcacgttgggct
gcgccaagaaatgaatatcgaccaggatatggtggtgggggtggccgtggcagtggatgg
ggcaacagaagtggtggtatggatcgtggtagagagcgggaagtgaacccctttggagat
gatgatgatacagaacagccttttactgagcaggaaactacaggaatcaactttgatgca
tacgaagacattcctgtggagaccagcggagaaaatgtgcctcctcctgtgaatacgttt
gcggagattgacttgggtgacgcattgaacgataatatcaggaggtgcaagtatgtaaag
ccaacacctgtacagcggcatgccatcccaatttctctttctggacgagacttgatggcc
tgtgcacagactggttctggcaagacagctgctttttgtttccctatcattggtggaata
atgagaggccaacctgtgcaaaggccaccccgtggtgcgcgtacagcttacccacttgcc
cttattctctcgccaacccgggagttatcagtgcaaatacatgaagaagctaggaagttc
tcctataaaacaggtgttagggtggttgttgcatatggtggagcaccaataaaccaacag
ctacgggaacttgagaggggtgttgatattcttgttgcaactcctggaagattggtagat
ttattggagagagctagagtctcattacagatgatcaggtatttggccttagatgaagca
gatcgtatgctggatatgggttttgagcctcaaattaggaagattgtgcaacaaatggac
atgcctccgccaggtgtgaggcagactatgctgttcagtgccacttttccgaaagagata
cagaggttggcgtctgattttcttgcaagttatatttttctggctgttggaagagttggt
tcaagtactgatttaattgttcaaagagttgagttcgttcttgaatctgacaagagaagt
caccttatggatcttcttcatgcacagagggcaaatggtgtacagggaaagcaagctctg
acattagtttttgtggagacaaagaaaggagctgattcactggaacattggttgtgtatg
aatggttttcctgcaactactattcatggagacaggtcacaacaggaaagagaatacgca
ttgaggtcttttaaaagtggaaacacccctatattggttgcgactgatgtggctgcacgt
ggtcttgatattccccatgttgcccatgtggtgaactttgatctgccaaatgatattgat
gattatgttcaccgaattggaaggacagggcgagcaggaaaaacaggtctggctactgca
ttcttcaacgagaacaatgcatcactagcaagggctttagcagatcttatgcaagaatct
aatcaagaagtacctgcttggctctcacggtttgctgcccgatcttcttttggtggaggg
aggaaccgacgttcaggaggaggccggtttggtgggcgtgacgtccgaagggagagttct
ttcaacaggggtggttctgattactatggcggaggtaatagcatcagtggtggatatggt
gcttcttctggcgggtatggtggtagcggatatggtcctggggtgaccagtgcgtgggac
tga
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