Quillaja saponaria (soapbark tree): O6P43_004170
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Entry
O6P43_004170 CDS
T09778
Name
(GenBank) polypyrimidine tract-binding protein 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_004170
Spliceosome [BR:
qsa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
O6P43_004170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RL
RBD_AKAP-17A
TGF_beta
UNC45-central
DUF1797
Motif
Other DBs
NCBI-ProteinID:
KAJ7974034
UniProt:
A0AAD7VFT4
LinkDB
All DBs
Position
3:complement(1977824..1985992)
Genome browser
AA seq
443 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAVNALQF
YANVQPSIRGRNVYVQFSSHQELTTMDQNSQGRGDEPNRILLVTIHHMLYPITVEVLSQV
FSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVTARSSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPSLPTEQKGGPSQTGYGDAGSMYVQASGARAVALPQMANAAAITAA
FGGGLPPGISGTNDRCTILVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALIQM
GDGFQAEFAVHFLKGAMLFGKHLEVNFSKHANITQGADTHEYMNSNLNRFNRNAAKNYRY
CCSPTKMIHLSTLPQDVTEQEIVNLLEEHGTIVNSKLFEMNGKKQALVQFETEEQATEAL
VCKHATSLSGSIIRISFSQLQTI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccttccaaggtcattcacgttcgaaacgtggggcatgaaatatctgaaaat
gatctgctccagttattccaaccattcggagtcataactaagcttgtaatgttgcgagca
aaaaatcaggcgcttctccaaatgcaagatattccttcagctgttaatgctttgcagttc
tatgcaaatgttcagcctagcattaggggaaggaatgtttatgtgcaattttcatcgcat
caagagctaacaacaatggatcaaaatagtcaaggacggggagatgagccaaatcgaatt
ctcttagttacaattcatcacatgctatatcctataacagtggaagtgctgagtcaagta
ttttctcctcatggatttgtggaaaagattgtaacgtttcagaagtcagctggctttcaa
gcgctcattcagtaccaatcacgtcagagtgcagttacagccagaagttcacttcaggga
cgtaatatctatgatgggtgctgtcagttggacatccaattctcaaaccttgatgaattg
caagtgaattacaacaatgagcgttcaagggatttcacaaatcccagtctgcctacagaa
cagaagggaggaccttcacaaactgggtatggtgatgcaggaagcatgtatgttcaagct
tctggagcaagggcagtggcacttccacagatggccaatgcggctgccattacggctgcc
tttggtggaggtttgcctcccgggataagtgggacaaatgacaggtgtacaattcttgtc
tcgaaccttaaccctgatagaatagatgaggataaactttttaacctgttctccatctat
ggtaacattgtgagaatcaagctactccgtaataaacctgatcatgcacttattcaaatg
ggcgatggcttccaggctgaatttgcagtgcactttttgaagggagccatgctttttggg
aagcatttggaggtcaacttctcgaagcatgcaaacataacccaaggtgctgatacacac
gagtacatgaattcaaacctcaaccgcttcaatcgaaatgctgctaaaaactaccgctac
tgttgctccccaacaaagatgatccacttgtccacacttccccaggatgtcactgaacaa
gaaattgtgaacctcctggaggaacatggcaccattgtaaatagcaagctctttgagatg
aatgggaagaagcaggccctggttcaatttgaaaccgaggagcaggccactgaagccctt
gtgtgcaagcatgccacctcactttctggctcaataattcggatttccttctcccagctg
cagacaatataa
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