KEGG   Quillaja saponaria (soapbark tree): O6P43_004405
Entry
O6P43_004405      CDS       T09778                                 
Name
(GenBank) putative Glycine-rich RNA-binding protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_004405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_004405
   03041 Spliceosome [BR:qsa03041]
    O6P43_004405
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     O6P43_004405
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     O6P43_004405
Spliceosome [BR:qsa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    O6P43_004405
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_MARF1 SET_assoc RBD_DEAH11
Other DBs
NCBI-ProteinID: KAJ7974315
UniProt: A0AAD7Q3P6
LinkDB
Position
3
AA seq 249 aa
MAFINKIGNILRQTAVKHINVELSASSPSIYQTIRCMSSSKLFIGGISYSTDDMSLKEAF
SRYGEIIDAKVILDRETGRSRGFGFITFTSSEEANSAIQGMDGQDLHGRRIKVNHATERS
RPGFGGGGSFGGGGFGGSNYGGSGSNYQSGYNDGGSFKFGNSGLDGPIGNSGTSGPDNRF
NANTGGDGGFSNSGLGDIFGSGYKADGGKLGSNQNDERGSDDGELDDDIFEKNMGENNDE
PDDLANNRG
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcattcatcaacaaaattggaaacatcctaaggcagactgctgtcaagcacatcaat
gtagaattatctgcatccagtccatcaatataccagacaatcagatgcatgtcttcttcg
aagctttttattggaggtatttcatatagcacggatgatatgagtctaaaagaagccttt
tcccgctatggagagataattgatgcaaaggttatattggatcgcgaaactggtagatct
agaggctttggcttcattacttttacatcaagtgaggaggctaattctgctatccaaggc
atggatggccaggatctccatggtcgaagaataaaggtgaatcatgctacagaaagatca
cgccccggatttggtggcggtggcagctttggtggtggtgggtttggaggcagtaattat
ggtggctctggcagcaactatcagtctggttataatgatggtggaagtttcaaatttgga
aacagtggtcttgatggtccaattggaaattctgggaccagtggccctgacaaccgtttc
aatgcaaatactggtggagatggtggattttctaacagtggacttggtgacatttttgga
tcaggatacaaggctgatggaggaaaactcggtagcaaccaaaatgatgaaagaggttca
gatgatggagaacttgatgatgacatctttgaaaaaaatatgggagagaacaatgatgag
cctgatgatttagctaacaatcgtgggtga

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