Quillaja saponaria (soapbark tree): O6P43_004410
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Entry
O6P43_004410 CDS
T09778
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_004410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_004410
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
O6P43_004410
Prokaryotic type
Archaeal type
TFB
O6P43_004410
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_Ribbon_TF
TFIIB
Ribosomal_S27e
ArfGap
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
KAJ7974320
UniProt:
A0AAD7VG64
LinkDB
All DBs
Position
3:3620775..3621422
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AA seq
165 aa
AA seq
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MSEGYCLDCKSYTPVVLDHKAGDVICSECGLVLESQLIDETAEWRYFADESDNNIDPNRV
GSPLLLSDGCSLVTFIANRNDALNRWTKKSILRPSNSVDRAFKTIAAMSDNLGLVETIEN
YAKELYEKSTVDVKFRRIKNSNAVMAACLSRRGFSPNIQGNCNGC
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggggtattgtttggactgcaagtcatatactccagttgtgttagatcacaaa
gcaggggatgtaatttgctccgagtgtggtttggttcttgagtctcaactcattgatgaa
actgcagaatggcgatatttcgccgatgaatctgataataatattgatccaaatcgtgtg
ggaagtcctctgttactgtccgatggttgtagtcttgtcacctttattgcaaatcggaac
gatgccttaaatcgatggacgaaaaaatctatattgaggcctagtaactctgtcgatcgt
gctttcaagacaattgctgcaatgtctgataatttaggcttggttgagaccatcgagaat
tatgccaaggagttatacgagaagagtactgtggatgtaaaatttagaagaatcaagaat
tccaatgctgtaatggctgcttgcttgtcaaggagagggttttccccgaacattcaagga
aattgcaacggctgctaa
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