Quillaja saponaria (soapbark tree): O6P43_005503
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Entry
O6P43_005503 CDS
T09778
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_005503
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_005503
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_005503
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Pre-60S particles
Helicases
O6P43_005503
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
O6P43_005503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
FlpD
Motif
Other DBs
NCBI-ProteinID:
KAJ7975607
UniProt:
A0AAD7VH43
LinkDB
All DBs
Position
3
Genome browser
AA seq
715 aa
AA seq
DB search
MPSIPLSDAILSESPKDKKEKKKKVKNQTFIEASETEGSIGKKSKKEPKLKNNPKESVSE
EEEMSEKKMKKKEGKKRKASDFEVMLNGEEDRSETSSELVEPVNDKKKKKKAKLDEVDQE
EEEVLKAKDPNAISNFRISEPLRAKLKEKGIEALFPIQAMTFHTILDGSDLVGRARTGQG
KTLAFVLPILESLTNGPAKAARKTGYGKAPSVIVLLPTRELAKQVHSDVEVYGGALGLTS
CCLYGGAPYSAQEIKLKRGVDIVVGTPGRIKDHMERGNIDFSSLRFRVLDEADEMLRMGF
VEDVELILGKVEDASKVQTLLFSATLPDWVKQISTRFLKPNKRTADLVGNEKMKASTNVR
HIVLPCSSAARSQLIPDIICCYSSGGRTIIFTETKESASTLAGLLPGARALHGDIQQSQR
EVTLSGFRSGKFLTLVATNVAARGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNSGV
AVMLYDPRRSNISKIERESGVKFEHISAPNPAEIAKAVGGEAAELITQVSDSVIPAFKSA
AEELLNTSGLSAVELLAKALAKTIGYTEVKKRSLLNSMENHVTVLLEIGRPIYTPSFAYG
VLRRFLPEEKVESVQGLTLTADGNGAVFDVAAEDLNIFLAGQENAANVSLEVVKELPPLQ
EREQSRGGRFGNNGFGFAGGNRFSSRRGGRDGRFSGQRNDRFSNGFRGGRGGKKW
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccttctatacctctttctgatgctattttatctgagagtcccaaagataagaaggag
aagaagaagaaggtgaagaaccaaaccttcatcgaagcttcagaaaccgaaggttcaatc
ggcaagaagagcaaaaaggagccgaagctcaaaaataatccaaaggaatccgtgtctgag
gaagaggaaatgtcggagaagaagatgaagaagaaggagggtaagaagcgtaaagcttca
gactttgaggttatgttgaatggggaagaagataggagcgagacaagctcggagttggtt
gagccggtgaatgacaagaagaagaagaagaaggctaagttggacgaggttgatcaggaa
gaagaggaggttctcaaggctaaggatcctaatgcaatttcgaactttagaatatcggag
ccgttgagggcaaagttgaaggagaagggaatagaagccctttttccaatccaggctatg
actttccatactattcttgatgggtctgatttggttggtcgggcgcgcactggtcagggt
aaaacactggcatttgtattgcccatattggagtcattgactaatggtcctgcaaaagca
gcacgaaagactggatatgggaaggcaccaagtgttattgtacttttacctaccagggaa
ttggccaagcaggtacattccgacgttgaagtttatggtggagcgttgggattgacttct
tgctgtttgtatggtggagcaccctacagtgctcaagaaattaaactcaagagaggggtt
gatattgttgttggaacaccgggacgcataaaggatcacatggagagaggaaatattgac
tttagctcattacggttccgtgtccttgatgaggctgatgagatgcttcggatgggtttt
gtggaagatgttgaactcattctaggcaaggtagaggatgcaagtaaagttcagacactt
ctttttagtgctactttgccggactgggttaagcagatttctactagatttcttaaaccc
aacaaaagaactgctgaccttgttggtaacgagaaaatgaaggctagcacaaatgttagg
catattgttcttccttgttctagtgctgcgagatcacaacttatcccagacataatttgt
tgttacagcagcggaggtcggacaattatattcactgagactaaggagtccgcttccacg
cttgcagggctgttacctggagcacgagctttgcacggtgacatacagcagtcacagcgc
gaggttactttgtcgggtttcaggtcaggaaaattcttgacactagtggccactaatgtg
gcagctcggggtttggatattaatgatgttcagttaattatacagtgtgagccaccacgt
gatgtagaagactacatacatcgatctggacgtacaggaagagcaggtaatagcggagtt
gctgtaatgctttatgatccaagaaggtcaaatatatctaagatagaaagagaatcgggt
gtaaaattcgagcatatatctgctcctaatccagctgaaattgctaaagctgtcggtgga
gaggctgctgaattgataacccaggtgtctgatagtgtgattcctgcatttaagtcggct
gctgaggagttactgaatacctctggtttatcagcagttgaattacttgcaaaagctctt
gccaagactattggttatactgaggtgaagaaaagatcacttctcaattctatggagaac
catgtcactgtacttcttgagattggaagacccatctacaccccatcttttgcttatgga
gttctgagaagattcttgcctgaggagaaggttgagtcagtgcaaggtcttactctcact
gctgatggaaatggtgctgtgtttgacgtggcagctgaagatttaaatatttttcttgct
ggtcaagaaaatgcagctaatgtgagcttagaggtagtaaaagaattgccgcctctgcaa
gaaagggaacagtcaagagggggtagatttggtaataatggctttggctttgccggtggt
aatagattttcatccagaagaggtggcagggatggtagattttctggtcaaagaaatgat
aggttctccaatggttttagaggcgggagaggtggtaagaaatggtga
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