KEGG   Quillaja saponaria (soapbark tree): O6P43_005880
Entry
O6P43_005880      CDS       T09778                                 
Name
(GenBank) Splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_005880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsa03041]
    O6P43_005880
Spliceosome [BR:qsa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    O6P43_005880
 Complex B
    O6P43_005880
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 Tox-GHH zf-CCCH_4
Other DBs
NCBI-ProteinID: KAJ7976051
UniProt: A0AAD7Q7U8
LinkDB
Position
3
AA seq 312 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTTSPTLLLSNMYQRPDMITP
GPDPDPNIAQVLDPDKVQDHFEDFYEDLFEELSKYGEIQSLNICDNLADHMVGNVYAQFK
EEDHAANALMNLNGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS
RELRKQLFGRNRRHGLSGSRSQSPPRHRNYDERPHSGRNPGKRGYDKDHRYHDRDRRLRS
QSPGRRMGRSRSPAGRKNRSLRENSAERRAKIEEWNRERELTESGNKNDRNNSEPEEKGF
AQNGSLYDDPQQ
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcgattttcgggacggaaaaggacagggtgaattgccctttc
tacttcaagatcggagcttgcaggcatggcgaccgctgctccagacttcatacgaagccc
actaccagtccaactcttcttctatccaatatgtaccagagacctgatatgatcactcct
ggtcctgatcctgatcctaatattgctcaagtactcgacccggacaaggtccaggatcac
ttcgaggacttctacgaagatttatttgaggagctgagcaaatatggagaaattcagagc
ttgaacatctgtgataatttggctgatcacatggttggtaatgtatatgcgcagtttaaa
gaggaagaccatgctgcaaatgcgcttatgaatctgaatggccgattttattcagggaga
cccatcatcgtcgacttctctcctgtgacggattttcgagaagctacatgtaggcagtat
gaggaaaatgtatgcaatcgaggtggctactgcaactttatgcatctgaagaagattagc
agggaattgagaaagcagttgtttgggagaaatcggcgacatgggctaagtggaagcaga
agccagagccctcccagacaccgtaattatgatgagcgtccccatagtggtcgtaatcct
ggtaaaagaggctatgacaaggatcatcgctaccatgatagggacaggaggctaagaagc
caaagtcctggaagaagaatgggaagaagtagaagcccagctggaaggaagaataggagt
cttagggaaaacagtgccgaaagaagagctaaaatagaggaatggaacagggaaagagaa
ttgacagaatctggtaacaagaatgataggaataatagcgagcctgaagagaagggtttt
gcacagaatggaagtctgtatgatgaccctcagcagtag

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