Quillaja saponaria (soapbark tree): O6P43_006150
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Entry
O6P43_006150 CDS
T09778
Name
(GenBank) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_006150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_006150
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_006150
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_006150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-ProteinID:
KAJ7976358
UniProt:
A0AAD7VHX4
LinkDB
All DBs
Position
3
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AA seq
898 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDNIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVSELELQVDNFEAELEGLSVKKGKTRPPRLIHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVIVAPPGLVKGPPALSLKTPLATSATPAIVTSPHQQGASVQEQVEDSASQDSNSDI
VARTPPAKNSISNSAASTPTGSNATPVSMNVPAHNLSGTPTAVAALPGSNSVRSALESTS
AANSSSSVNQSATIKEEDINSFPIRRPSPSLSDAGLVRGINRGGLSSQAASGMPLSSSNL
VPSNGALGAVPSASDITKRNILGADDRLGSSAMLQPLVSSQSNRMILPQTVKANDGTGSV
ESTNVNEAATVAGRVFSPPLIPGMQWRPGSSFQNQNEAGQFRGRTEIAPDQREKFLQRLQ
QVQQQGHSTLLGMPSLSGGNHKQFSTQQQNPLLQQFNSQSSSVSSQSGLGLGVQAPGLNS
VSSTSLQQPPNSVHPQSSQQTLMSTVPNDVDIVNSKVEEQLQQTLPDDSAMESSASTGLG
KNLLNEDDLKATFPADVSAGLSGSLSEPSQVTRDTDLSPGQPLQSNQTSGSLGVIGRRSV
ADLGAIGDSVSGSSVTSGGMHDQLYNLQMLEAAYYKLPHPKDSERARTYTPRHPAITPPS
YPQVQAPIVNNPAFWERVGLEPHGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYN
TWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaagtcgaaagcttcagggtgaaatagatcgtgttctgaagaaggtccaagaa
ggggtcgatgtattcgacaatatctggaacaaggtttacgataccgacaatgcaaatcag
aaggagaagtttgaggcggacttgaagaaggagattaagaagcttcagaggtacagagat
cagattaagacttggattcagtctagcgagatcaaggataagaaggttagtgcctcttat
gagcaggctctggtggatgcccgcaagctcattgaacgtgaaatggaacgattcaagatc
tgtgaaaaagagactaagactaaagcattctctaaagaaggcttgggccaacaacctaaa
actgatccaaaagagaaggctaaatcagagacaagggattggttgaacaatgtggttagt
gagttggaattacaagttgataattttgaagccgagcttgaagggttatctgttaaaaaa
ggaaagaccaggcctcccagactgatacatttagagacatctattactcgacacaaggct
catataatgaaattggaactgatcttgaggttgctagataatgatgaattgagtcctgag
caagttaatgatgtaaaggatttcttagatgattatgtggagcgtaatcaggaagacttt
gatgaatttagtgatgttgatgagctttacagttcacttcctttagataaggtggaatct
cttgaagatcttgttatagtcgctcctcctggtcttgttaagggtccacctgctcttagc
ttgaagactcctttggcaacatctgcaacacctgccattgtgacttctcctcatcagcag
ggtgcttctgtccaggagcaggttgaggattcagcttcccaggatagtaattctgatatt
gttgctagaactccacctgccaaaaatagtattagtaattctgctgcatcaacaccaact
gggagtaacgctacgcctgtttcaatgaatgttccagctcataatttgtctggtacacca
acagctgttgcagctcttcctggttcaaattctgttcgaagtgccttggagagtactagt
gctgctaattcttcctcctctgtgaatcagtctgctactataaaggaagaagacattaat
agcttccctatcaggagaccatctccatcgctctctgatgctggacttgttaggggcatc
aatagaggcggcctctccagtcaagctgcatctggtatgcctctaagttctagcaattta
gttccaagcaatggggctcttggtgcagtcccttcagcctcggacataacaaagagaaac
atattgggagctgatgatagacttggaagtagtgctatgctgcaacctcttgtatcctcc
caaagtaatagaatgattttacctcagactgtgaaggctaatgatggaactggctcagtt
gaatctactaatgtaaatgaggctgcaactgtagctggaagggttttctcccctcctttg
attcctggaatgcaatggaggcctggaagttctttccaaaaccagaatgaagcggggcag
tttcgcggaagaactgaaatagctcctgaccagagagagaaatttttgcagcggctccag
caagtacagcaacaaggacacagcactcttcttggcatgccttcactttctgggggaaat
cataagcagttttctacccagcagcaaaaccctctcttgcaacagtttaactctcagagc
tcatctgtctcttcccagtctggtctgggacttggagtacaggcaccaggtctcaatagt
gtttcatctacttcattacagcaacctccaaattccgtccatccccaatctagtcaacag
acattgatgtcaactgttcccaacgatgttgatatcgttaattccaaggttgaagaacag
ttgcagcagactttgcctgatgattctgctatggaatctagtgctagtactgggcttggc
aaaaatctcttgaatgaggatgacttgaaagccacatttcctgctgatgtttctgcagga
ctatctggttctttgtcagaaccttctcaagttactcgagatactgatctatctcctgga
caacctttacaatccaatcaaacttctggcagccttggtgttattggtaggagaagtgtt
gctgaccttggtgcaattggtgatagtgtcagtggatctagtgtaacttctgggggaatg
catgaccagttatataatttgcagatgcttgaggctgcatactacaaacttcctcatcct
aaagactcagaacgtgcaaggacttacactcctagacacccggcaataacacctcctagc
tatcctcaagtgcaagcacctatcgttaataaccctgccttctgggaacgagtaggtctt
gaaccacatgggactgataccctgttctttgcattttattatcaacagaacacttatcag
caatatttggctgcaaaagagctaaagaagcagtcttggagataccacagaaagtataac
acatggtttcaacggcatgaagagccaaaagtggccactgatgaatatgagcaggggaca
tatgtatactttgatttccatattgccaatgatgacctacagcatgggtggtgtcaaagg
ataaagactgagttcacttttgagtacaattatcttgaggatgagcttattgtatag
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