Quillaja saponaria (soapbark tree): O6P43_006261
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Entry
O6P43_006261 CDS
T09778
Name
(GenBank) Cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
O6P43_006261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_006261
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
O6P43_006261
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
TPR_15
HAT_Syf1_CNRKL1_C
TPR_2
TPR_16
TPR_9
ANAPC16
TPR_Edg1
Motif
Other DBs
NCBI-ProteinID:
KAJ7976482
UniProt:
A0AAD7Q7T3
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Position
3
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AA seq
769 aa
AA seq
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MDMDKTTVNDDKPTVDKYNVEAAEILANEAQRLPIAEAIPIYEQLLTLFPTAGKYWKQYV
EAQMAANNDDATKQIFSRCLLNCLQVPLWRCYIRFIRKVNDKKGVEGQEETRKAFDFMLS
YVGSDIASGPVWMEYISFLKSLPALNTQEQSQRMTAVRKVYQKAIITPTHHIEQLWRDYE
NFENSVNRQLAKGLVSEYQPKYTSARAVYRERKKYVDEIDWNLLAVPPTGSYKEELQWMA
WKRLLAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDIWYDYAIWHAKGGSVDAAIK
VFQRALKALPDSEMLRYAYAELEESRGAIQPAKKIYESLLGDGDSTTALAHIQFIRFLRR
TEGVEAARKYFLDARKSPSCTYHVYVAYAKMAFCLDKDPKIAHNVFEAGLKRFMHEPVYI
LEYADFLTRLNDDQNIRALFERALSTLPAEESVEVWKIFSQFEQTYGDLASMLKVEQRKK
EALYGTIEEGASVLEGSLQDVVSRYSFMDLWPCSSRDLDHLAQQEWLAKNINKKVDKSAL
PNGPGFVDGVSSGLISNSNVSGKVVYPDTSKMVVYDPRQNPETAMVPSTTTPGLPVSSST
LSNSNQFVAVSGGGSTNAFDEILKATPPALVAFLSNLPAIEGPTPNVDIVLSICLQSDLS
MGQSGKLGTPPTQLPAGPAPSTSELSASSKSHPIPSASSFKPTSNRHYGKRKEVDRREDD
DTVTVQSQPLPRDVFRIRQIQKARASSTSQTGSASYGSALSGDLSGSTG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggacatggataaaactactgtcaatgatgataaacccacggtggataaatacaatgtt
gaagccgcagaaatcttggcaaatgaggctcagcgtttacctattgcggaggcgataccc
atatatgagcagcttctgacactgtttccaacagctggaaagtattggaagcaatatgta
gaggcacagatggctgcaaataatgacgacgctaccaaacagatttttagccgttgttta
ttgaattgtcttcaggttcctctttggaggtgctacattcgttttattagaaaggtcaat
gacaagaagggggtagagggtcaagaagagactagaaaagcttttgattttatgctcagt
tatgttggatctgacatagcatctggccctgtatggatggagtacatatccttcttaaag
tcattaccggcgctaaacactcaggaacaatcacagcggatgactgcagtgcggaaagtg
taccaaaaagccattattactcccacccatcacattgaacaactttggagggattacgag
aattttgaaaactctgttaaccgccagttggcaaaaggactggtttctgaatatcaaccg
aagtatactagtgccagggctgtctacagggagcgaaagaagtatgttgatgaaattgat
tggaatttgcttgctgtaccaccaaccggttcctacaaggaagaactgcagtggatggca
tggaagaggctgttagcttttgaaaaaggaaatccacaaaggatagacagtgcatcctcc
aataaacgaattatatttacttatgagcagtgtctgatgtatctataccattatcctgat
atatggtatgactatgctatatggcatgcaaaaggtggttcagtagatgcagcaatcaaa
gtatttcagcgagctttgaaggctcttccggattcagaaatgctaaggtatgcttacgct
gagctggaggaatctcgtggagcaattcagcctgcaaagaaaatatatgagagccttttg
ggggatggcgacagcacaacagcacttgcacatatacaattcattcgctttctaagaagg
actgaaggtgttgaagcagctcggaagtactttttagatgctcggaagtccccaagttgc
acgtatcatgtttatgttgcttatgcaaagatggcattctgtcttgacaaggatcctaag
attgcgcacaatgtttttgaagcaggactgaaaaggtttatgcatgagcccgtctacatt
cttgaatatgcagattttttgacacgtttaaatgatgaccaaaatatacgggctttattt
gagcgggcattaagtacgctcccagctgaggaatctgttgaggtctggaaaattttttcc
cagtttgagcaaacttatggagatctggcaagcatgttgaaggttgagcaaagaaagaaa
gaagctctttatggaaccattgaagagggagcatcagtattggagggttcacttcaagat
gttgtttcacgttacagtttcatggatctttggccatgttcctcaagggatcttgatcat
ttagctcaacaggagtggctggcaaaaaatattaataagaaagtggataagtctgctctg
ccgaatgggcctgggtttgtagatggggtgtcttcaggtctaataagtaattcaaatgtg
tctggaaaggttgtttatcccgatacttctaagatggtggtatatgatcccaggcaaaat
ccagagacagcaatggtgccaagcacaaccacacccgggcttcctgtttcatctagcacc
ttgtcaaactcaaatcaatttgttgcagtgtcgggtggtggatcaacaaatgcatttgat
gaaattctgaaagctacaccgccagctttggtagcttttctatcaaacttgcctgcaatt
gagggtccaacaccaaatgtcgatattgtactatcaatttgtttgcagagtgacttatca
atgggacagagtgggaaattagggactcctccaacgcaattgccagcgggtcctgctcct
agtacaagtgaactttctgcttcaagcaagtctcatcctattccaagtgcatcatctttt
aaaccgaccagtaatagacactatgggaaaaggaaagaagtagacaggagagaggacgat
gacactgtaactgttcaaagtcaaccactacctagagatgtttttcggatacggcaaata
caaaaagctcgagcaagtagcacttcacaaacaggatcagcttcatatggaagtgccctt
tcgggtgatctatctggtagcactggctga
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