KEGG   Quillaja saponaria (soapbark tree): O6P43_006267
Entry
O6P43_006267      CDS       T09778                                 
Name
(GenBank) RNA-binding protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_006267
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_006267
   03041 Spliceosome [BR:qsa03041]
    O6P43_006267
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     O6P43_006267
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     O6P43_006267
Spliceosome [BR:qsa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    O6P43_006267
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 BUD22 PHM7_cyt
Other DBs
NCBI-ProteinID: KAJ7976489
UniProt: A0AAD7Q7U4
LinkDB
Position
3
AA seq 507 aa
MARKRKLESKSAEPAKKQQQNINLEQVVREETQPEPEEDVEDQGHEEEAEYEEVEEEVEE
EEEEEDEEGEEEEDDDEEEEEDDNDDPDNIQNGNDQTAKAPSTSRSVTDQDGKGDDDEEP
IQKLLEPFSKEQIVNLLLEAADKHRDVADRIREVANEDPVHRKIFVHGLGWDTNTETLNN
AFKQYGEIEESKAVYDKASGKSKGYGFILFKTRSGARKALKQPQKKIGSRMTSCQLASIG
PVAPPSAAQAVPQQLALPPQQPASEYTQRKIYVSNVGADLDTQKLLTFFSSYGEIEEGPL
GLDKATGRPKGFCLFVYRTADSARKALEEPHKNFDGHILHCQKAIDGPKPGKSQYQHHQN
PRNTQFQRNNSANFSSEAATGHGHLMAPAGPGIAFNQGAAAAQALNPALGQALTALLASQ
GAGLGLTNLLGTLGSAATVNTGVPGASHGIQGGYGNQPNITPGVIGGYGNQGGIQGGYPS
QQIGQSGSGRGQPGVGQYGGVPPYMGH
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggcgaggaagcgaaagctcgagtccaaatctgccgaacccgcgaaaaagcaacaacag
aacataaatctcgagcaggtcgtaagggaagagacccaaccggaaccggaggaagatgtt
gaagaccaaggacatgaagaagaagccgagtacgaggaagtcgaagaagaagtagaagag
gaagaggaagaagaagacgaagagggggaagaagaggaagatgatgatgaggaggaggag
gaggatgataacgacgatcctgataatatccaaaatggtaatgatcagactgccaaagct
ccatccacttcaaggtcggtgacagatcaagatggtaaaggtgatgatgacgaagagcca
attcagaagcttctcgaaccgttcagcaaggagcagattgtaaacctgcttttggaagca
gcggataagcatcgcgatgtggcggatcggatccgtgaggtggccaatgaggatccggtg
caccgtaaaatctttgtgcatggcttagggtgggatacaaatactgagactttgaacaat
gcattcaagcagtacggcgagattgaagaaagcaaggctgtatacgataaggcatcaggg
aaatccaagggctacggtttcatcctgtttaaaactcgtagtggggctcgcaaggcattg
aagcagcctcagaaaaagattgggagtcggatgacgtcctgtcagctggcctccattggt
cctgtggcaccgccaagcgcagcacaagctgtcccccaacaacttgctcttcccccacaa
cagcctgcatctgagtatacacagaggaagatatatgtgagcaatgttggggctgatttg
gatacgcaaaagttgcttactttcttttcaagttatggggagatagaggaaggaccgctg
gggctcgataaggccacaggtaggcccaaggggttctgtttgtttgtttataggacggca
gacagtgcaagaaaggccttagaagagcctcacaagaactttgatggccatatcttgcac
tgtcagaaagctattgatggtccaaagccaggaaagtctcaatatcagcatcatcaaaat
cctcgtaatacccaattccaaagaaataatagtgctaacttttctagtgaagctgctact
ggacatgggcacttgatggcgccagcagggcctgggattgcatttaatcagggggccgct
gctgcacaggccttgaatccggcacttggtcaggcattgactgcactgcttgcatcacag
ggtgcgggcttggggctgactaatttgttgggtaccctaggatcagctgccacggttaat
acaggtgttcctggtgcaagtcatgggatacagggtggatatggtaaccagccaaatata
acccctggagttattggaggatacggaaatcaaggaggaattcagggtggatacccgagc
cagcagatagggcaaagtggctctggaagaggccagcctggtgttgggcaatatggcggc
gttcccccttacatggggcactag

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