Quillaja saponaria (soapbark tree): O6P43_006303
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Entry
O6P43_006303 CDS
T09778
Name
(GenBank) Transcription elongation factor spt6
KO
K11292
transcription elongation factor SPT6
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_006303
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_006303
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
O6P43_006303
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
O6P43_006303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
HHH_3
HTH_44
SH2
Tex_YqgF
Motif
Other DBs
NCBI-ProteinID:
KAJ7976531
UniProt:
A0AAD7Q8T3
LinkDB
All DBs
Position
3
Genome browser
AA seq
1653 aa
AA seq
DB search
MGKGVVSDEEEEVELEEDERETADGGALDRDGDDYEDEDDGQDEYEKDGFIVDDIEDEEQ
DEEERAESDEERQKKKKRKKKEEYLLDDDDYELLEDNNINIHRRKDSKQFKRLKKANKRD
AEEEPSGFSDDEEFLGSGKGGRTAEEKLKRTLFGDDEGAPLDDIAEEEEQAEEDDDANLA
DDDEMADFIVDEEVDENGAPLRQRKLKKKKNKQAQGISSSALQEAQELFGDVDELLLRRK
EGLNISDYKETRLEDEFEPIVLSEKFMTEKDNQIREIDIPERMQVSEESTGSPMDESSLE
EESHWIRNQLVNGMVPWICKRNMEDTGILEAARTPESARNQQERDEGSLPIGRVDILRFL
ELHHVQKLDIPFIAMYRKEECPSLFKDMELLETNDDIWDKNEKTPTIKWHKVLWAIQDLD
RKWLLLQKRKTALNSYYNKRFEEESRRIYDETRLTLNRQLFESVMRSLKAAESEREVDDV
DSKFNLHFPPGEAGVDEGQYKRPKRKSLYSDCSKAGLWEVANKFGYSSEQFGLQLSLVPM
DELEDPKETPEEMASNFTCKLFETPQAVLKGARHMAAVDISCEPSVRKHVRSNFMEHAVI
STCPTADGNVAIDSFHQFSGVKWLREKPLSKFDDAQWLLIQKAEEEKLIQVTLKMPEKDL
DRLVNDFNLYYLSYGVSRSAQLWNEQRKLILQDALFGFLIPSMEKEARSLLMNRAKNWLR
MEYGKVLWNKVSVGPYHRKDNDLSSDDEAAPRVMACCCSPVKPTTFVMLDSSGEVIDVLH
TGALTLRSQNVNDQQRKKNDEERVLKFMTDHQPHVVVLGAANLSCTRLKEDIYEIIYKMV
EENPRDVGHEMDGLSVVYGDESLARLYETSRISSDQLPGQSGIVKRAVALGRYLQNPLAM
VATLCGPVREILSWKISSLESFLTPDEKYWMVEQVMVDVTNQVGLDINLAISHEWLFAPL
QFISGLGPRKAASLQRSLVRDGAIYTRKDFVTTHGLGKKVFVNAVGFLRVRRSGLAASSS
QFIDLLDDTRIHPESYGLAQELAKVVYDADGPGDANDDDDALEMAIEHARDRPTYLKHFD
IDDYAKSKKRENKRETFHDIRRELIQGFQDWRKQYEEPSQDEEFYMISGETKETLAEGRI
LQATVRRVQPQKAICVLESGLTGMLMKEDYTDHWRDITELSDRLHEGDILTCKIKSIQRN
RYQVFLVCRESEMRSNRFQNVSNLDTYFHEDPSSLQSEHDKARKEKELAKRHFKPRMIVH
PRFQNITADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKVYEGVYAHKEIVEGGKDHKD
ITSLLRIGKTLKIGDDTFEDLDEVMDRYVDPLVTNLKAMLNYRKFRRGTKAEVDELLRLE
KAEEPRRIVYCFGISHEHPGTFILTFVRSTNPHHEYVSLYPKGFKFRKRMFVDIDRLVAF
FQKHIDDPQQDSSPSIRSVAAMVPMRSPATGGSSGTSVASGWGGSTNEGGWRSHSYDRDR
SSTPVSRTGRNDYRNNSSQDGHPSGLPRPYGGHGRGRGRGSSKSSIGNERQDSGYDAPRW
GSVSKDGDGGLSNFPGAKVLNSPGKEAFPGGWGTEGSGGGGSGWGGNSGSNGRGGSSSSN
NRGWGQGSGGADRSWAGADANDNDTHNQNSGWG
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggcgtcgtctcagatgaagaagaagaggtcgaactcgaagaggatgagaga
gagaccgctgatggaggcgcattggaccgtgatggggacgactatgaggatgaagatgat
gggcaagatgaatacgagaaggatgggtttatagttgatgacatagaagatgaggagcaa
gatgaagaagagagggcagaaagcgacgaggagaggcagaagaagaagaagaggaagaaa
aaagaggagtatctccttgatgatgatgactatgagcttttggaagacaataatatcaat
attcatcgacggaaggatagcaagcagtttaagaggctgaaaaaagctaataagagggat
gctgaggaggagccttctggattttctgatgacgaggagttccttggaagtggtaaaggt
gggcgaactgcagaggagaagcttaaacgcactttgtttggtgatgatgaaggagctcca
ctcgatgacattgctgaagaggaggaacaagccgaagaggatgacgatgcaaaccttgct
gatgatgatgaaatggcagactttattgtggatgaagaagttgatgagaatggagctcct
ctgagacagaggaagctgaagaaaaagaagaataagcaggcacaaggaatttcctcatct
gctttgcaggaagctcaagaattatttggtgatgttgatgagctccttctccgtcgtaag
gaaggtctaaatataagtgactataaagaaaccaggcttgaggatgaatttgaaccaatt
gttctctctgagaagtttatgacagagaaggacaaccagattagagagattgacattcca
gagagaatgcaggtatctgaggaaagcactggttctccaatggatgaaagtagtttagaa
gaagagagtcactggatacgtaatcaacttgtaaatgggatggtaccttggatttgcaag
aggaatatggaagacacagggattctggaagctgcgcggactccagagtctgctaggaat
cagcaagagagagatgaaggaagtttaccaattggcagggttgatattttaagatttttg
gagttacatcatgtgcaaaaattagatattccttttattgccatgtatcggaaggaggag
tgcccaagcctattcaaagatatggagctacttgaaaccaatgatgatatctgggataag
aatgagaaaacacctactataaagtggcacaaggttctttgggcaattcaggatttggac
agaaagtggctgcttcttcagaagcgaaagactgctctaaactcatactacaataagcga
tttgaagaagagtctcgccgcatttatgatgaaacaagacttactttgaatcggcaattg
tttgaatcagttatgaggtcgctcaaggcagcagaatcagagagagaggtcgatgatgta
gactcaaagttcaacttgcatttccccccaggtgaagccggtgttgatgaaggacaatac
aagagacctaaaaggaaatcactgtatagtgattgcagtaaagctggtctgtgggaagtt
gcaaacaagtttggatacagctctgagcaatttggtttgcagctgtcactagttccaatg
gatgagttggaggatcctaaagaaacgcctgaggagatggcttcgaactttacttgtaaa
ctgtttgagacacctcaagctgttctcaaaggggctaggcacatggctgccgtggacata
agttgtgagccttctgtcaggaaacatgttcgtagcaacttcatggaacatgctgtcata
tcaacttgtccaactgcagatggaaatgtggcaatagattctttccatcagttttctggg
gtgaagtggttgcgtgagaagcccttgagtaaatttgatgatgcacagtggcttcttata
cagaaagctgaagaggagaaacttattcaagttactcttaagatgccagaaaaggattta
gatcgtttggtaaatgattttaatttatattatcttagttatggtgttagtagatctgct
caactatggaatgagcagaggaaattgatactgcaagatgcactgtttggttttctcata
ccttcaatggaaaaagaggcaagatccttgttaatgaatagagcaaagaactggttacgt
atggaatatgggaaggtgttgtggaataaagtttctgttggaccatatcatcggaaggat
aatgatcttagctctgatgatgaagctgcacccagggtgatggcctgctgttgtagccct
gtaaagccgacaacttttgtgatgttagattcatcaggagaggtgatagatgtccttcac
actggggcccttactctacggtctcagaatgttaatgaccagcaacgtaagaaaaatgac
gaagaacgagttttgaagttcatgacagaccatcaacctcatgttgttgttttaggagca
gcgaatttgtcttgcacccgtttgaaggaagatatatatgagatcatttataagatggta
gaagaaaatcctagagatgttgggcatgaaatggatggtttaagcgttgtatatggggat
gaatctctagcccgtctttatgaaacttctcggatttcatccgaccaacttccggggcaa
tctggtattgtaaagcgagctgttgctcttggtcgatatctgcagaatccgttggcaatg
gtggcaactttatgtggacctgtaagggagatcttatcttggaaaataagctctttggag
agctttctcacccctgatgagaagtattggatggttgaacaggttatggtggatgttact
aatcaggtaggtctagacattaatttggccataagtcatgagtggttatttgcccctcta
cagtttatatctgggcttggtcccagaaaggctgcatctttacagagatccctggtaaga
gatggggctatttatacccggaaagattttgtgactacacatggactgggtaaaaaggtt
ttcgtcaatgctgttgggttcttgcgagtgcggaggagtgggttggctgctagcagcagc
caatttattgatttgttggatgatactagaattcatccagagtcttatggccttgctcaa
gagttggccaaagttgtgtatgatgccgatggcccaggtgatgcaaatgatgatgatgat
gcacttgagatggcaatagagcatgcgagagatcgaccaacttatttaaaacattttgat
attgatgattatgccaagtccaagaaacgcgagaacaaaagggaaacttttcatgacata
agaagggagctaattcagggttttcaggattggcgtaaacaatacgaagaaccaagtcag
gacgaggaattctatatgatttccggtgaaactaaagaaacacttgcggaaggaagaata
ctgcaagccacggttcgcagggtgcaacctcaaaaagcaatttgtgtacttgaatctgga
ttgactggtatgcttatgaaggaagattacacagatcattggagggacataaccgaatta
tctgacaggctgcatgaaggtgatattctcacgtgcaaaatcaaatcaattcaaagaaat
aggtatcaagtgttccttgtttgtagggagagtgaaatgagaagtaataggttccagaat
gtcagtaatcttgacacctatttccatgaagatccgagtagcctacaaagtgaacacgac
aaggcccgtaaagaaaaggagcttgcaaaaaggcacttcaagccaaggatgatagttcat
cctcgcttccaaaacataactgccgatgaagcaatggagtttttgtccgacaaagaccct
ggagaaagtattatccgccctagttcacgtggtccttcatatcttactttgactctaaaa
gtctatgagggggtttatgcccacaaagaaatagttgaaggtggaaaggaccacaaggac
atcacaagcttactccgtattgggaagacgctaaaaattggagacgacacttttgaggat
ttggatgaggtaatggaccgctatgttgatcctttagtgactaacttgaaggcaatgttg
aactaccgcaagtttaggaggggtacaaaagcagaagttgatgaactcttgaggttggag
aaagcagaggagcccaggcgaatagtttattgcttcggcatctcccatgaacatccaggc
acatttatcttaacttttgtgagaagtacaaacccacatcacgagtatgttagcctttac
ccaaaggggttcaagtttcgaaaaaggatgtttgtggacattgatcgactggtcgcattt
ttccagaagcacattgatgatcctcagcaggattcatccccctcaataagatctgtggct
gctatggtgccaatgcgtagtcctgcaactgggggctcttcagggacatctgtagctagt
ggttggggtggttcaaccaatgagggaggctggagaagtcactcttatgatagggatcga
tcttctacacctgtgtcaaggacaggacgaaatgattatagaaacaatagtagtcaagat
ggacacccaagtgggctgcctcggccatatggcgggcacgggcgtgggcgtgggcggggc
tccagtaagagcagcattggtaatgagaggcaggattctggttatgatgcaccaagatgg
ggatcggtttccaaggacggggatggtggtttgagcaattttccaggagccaaagtttta
aactcccctggcaaggaagcttttcctggtggttggggaactgaaggaagtggcggtgga
ggcagtggttggggtggcaatagtggaagcaatgggcgtggtggatccagcagcagcaac
aatcgggggtggggacaaggtagcggtggtgctgacagaagctgggctggagcggatgca
aatgataatgacactcacaatcagaactctgggtgggggtag
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integrated database retrieval system
