KEGG   Quillaja saponaria (soapbark tree): O6P43_006502
Entry
O6P43_006502      CDS       T09778                                 
Name
(GenBank) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O6P43_006502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_006502
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     O6P43_006502
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: KAJ7976773
UniProt: A0AAD7Q8B2
LinkDB
Position
3:28388679..28394331
AA seq 318 aa
MGLPNDSGDLSSEIDVDAFRRLFPLRFHERHLAESIRPDARPLGRARDTTIALGAVASAN
GSALAKIGSTAMLAAIKMEVMTPSKESPDEGCIAIDFHMPPICSPIVRPGRPAEVAPVVS
KRLSDTISSSGMIDLKELSLVSGKAAWIGIPGKHSYRLHSSISRVDMMYTAWMQMVLYLM
LRYFSAVAALSHLHVPAVSLNDDGKIVLMLEDDGQKLATEPVNKDKRKLTLRSIPFSLTC
ILHKNYILADPTAEEEYIMETLVTVVLDSTSQLISLYKPGGPVLAYTSAVQDCVALTRQR
VKELQKIIDEANSGMEVD
NT seq 957 nt   +upstreamnt  +downstreamnt
atggggctaccaaatgattctggggatttatcatctgaaattgatgttgatgcctttaga
cgactgtttccacttcgatttcacgagcgtcaccttgctgaatctatacgtcctgatgcc
agaccacttggaagagctagagatactactattgcacttggggctgttgcatctgctaat
ggatcagcactggcaaagattggctcaactgcaatgttggctgctatcaaaatggaagtt
atgactccctcgaaggagtcaccggatgagggctgcatagccattgatttccacatgcct
ccaatttgttctccaattgttaggcctggcaggccagctgaggtagcaccagttgtgtca
aagcggttatctgacactatttcaagttctggcatgattgatttaaaagaattgtctttg
gtcagtggaaaagctgcatggataggcatacctggtaagcattcttatcgtctgcattca
tcaatcagccgtgttgatatgatgtatactgcttggatgcagatggttctctatttgatg
ctgcgttacttttcggcagttgctgccttatctcatttgcatgtccctgctgtttcttta
aatgatgatgggaaaatagtgctcatgttggaggatgatggacaaaagcttgcaacggag
ccagttaacaaggataagaggaagcttacactaagaagcatcccattttcattaacatgc
atacttcacaaaaattacatcttggcagatccaactgcagaggaagaatacatcatggaa
acccttgtgactgtggttctggattcaactagtcaactcatatctctttacaagccaggt
ggaccagttcttgcttatacatcagctgtccaggattgtgttgcattgactaggcaaaga
gtaaaggagctacagaagattatagatgaagctaattctggtatggaggttgactag

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