Quillaja saponaria (soapbark tree): O6P43_007049
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Entry
O6P43_007049 CDS
T09778
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
qsa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_007049
09124 Replication and repair
03420 Nucleotide excision repair
O6P43_007049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_007049
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_007049
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_007049
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
O6P43_007049
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
O6P43_007049
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
O6P43_007049
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
O6P43_007049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
SNF2-rel_dom
NAMPT_N
DnaB_2
AAA_11
AAA_19
Motif
Other DBs
NCBI-ProteinID:
KAJ7977420
UniProt:
A0AAD7Q9X7
LinkDB
All DBs
Position
3
Genome browser
AA seq
758 aa
AA seq
DB search
MKFQIEDVTVYFPYDHIYPEQYAYMLELKRTLDAKGHCLLEMPTGTGKTIALLSLITSYT
LSKPQNPVKLIYCTRTVHEMEKTLAELKLLHKYQVQHLGPASRILALGLSSRKNLCINQR
VLAAENRDSVDAACRKLTASWVRAVAAENPSIPTCEFFEQYEKAGSGAVLPPGVYTLQDL
RAFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVVVFDEAHNID
NVCIEALSVSVRRQTIEGARRNLNRMRREIDTFKATDAGRLRAEYNRLVEGLALRGDMAN
TDNWLSNPALPDDILKEAVPGNIRKAEHFLHVLHRLVQYLEGRLETENVEKESPVVFVAS
IVNHAGIDQKTLKFCYDRLHSLMLTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEP
FDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS
FTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFV
SYSYMDGIINNWNENGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAIFFSVA
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHIAREF
LRKMAQPYDKAGGSGRKTLLSQEDLEKMVEGNMNDMFY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccaaatagaagacgtaactgtgtacttcccctacgatcacatatacccagaa
caatatgcatacatgcttgagctcaagcgaaccctcgacgccaagggtcattgtctcctt
gaaatgccaacaggtacaggtaagacaattgccctcctttcgctaatcacaagttacact
ctttccaagcctcagaaccctgtcaagctcatctactgtactcgcactgtccacgagatg
gagaagacactcgccgagctcaaattgcttcataagtaccaggttcagcatctgggtccg
gcttctaggatcttggcattgggtctatcgtcgaggaagaatctttgtatcaatcagagg
gttttggctgcggaaaatcgggactcggttgatgcggcctgtcgcaaattgacggcgagt
tgggtcagggctgtcgcggctgagaatcccagcattcccacttgtgagttttttgagcag
tatgagaaagcggggtccggggcggtgttacctcctggagtttataccttgcaggatttg
agggcatttgggaaggagaaagggtggtgtccatactttttggctcgacatatggtgcaa
tttgctaatgtggtggtttatagttatcaatatttgcttgatccaaaggtagctgggatt
atatctaaggaaatgcagagggagtctgttgttgtctttgatgaggcccacaatatcgat
aatgtgtgtattgaagcacttagtgttagtgtgaggaggcagactatagaaggtgccaga
agaaatctcaataggatgcgtcgggagattgatacgttcaaggccactgatgctggtaga
ctccgtgcagaatataacaggcttgttgagggtttggcactaagaggagacatggccaat
acagataactggctatccaatcctgccttgcctgatgatattctgaaggaggctgtgcct
ggaaacattcgcaaagcagagcattttcttcatgttctacataggttagtccagtatctt
gaaggacgcctggaaacagagaatgtggagaaagaaagccctgttgtgtttgttgcctcc
attgttaatcatgctggaattgaccagaagacactgaaattttgttatgatcgcttgcat
tcactcatgttgacattagaaattactgacacggatgaattcctacatatccaaactatt
tgtgattttgcgacgcttgtggggacatatgctcgtggtttctcaatcataattgaacct
tttgatgagagaatgccgcatattcctgatcctgtattgcagcttagctgccatgatgct
tctcttgccatcaagcctgttttcgagcgatttcaatcagttgtgattacatcaggaaca
cttagcccaatagatctgtaccctcgtcttctgaatttcaaccctgttgtcagtcgaagt
tttacaatgtccttaactagagattgcatatgcccgatggttcttactcgtggcagcgat
cagctccctgtaagtaccaaatttgatatgagaagtgatcttggtgtagtaaggaattat
ggaaggctcttactggagatggcttctgttgtcccagatgggattgtatgtttctttgtc
agttactcatacatggatggaataatcaataattggaatgaaaatggaattttaaaggaa
attatgcagcataagcttgttttcattgaaactcaggatgttgtagaaaccactttagct
cttgacaattatcgcaaggcttgtgactgtgggagaggtgctatctttttttctgttgcc
aggggaaaagttgctgaaggaattgacttcgatcgacattatggaagactagtgatcatg
tttggtgttccttttcaatatacattaagcaagattttgctggcacgtttggagtactta
cgggacacctttcagattaaggaaggagattttttgacttttgatgcattgagacaagct
gctcaatgtgtggggagagtaatacggtcaaaggctgattatggaatgatgatttttgct
gataaaaggtatagccgtcatgacaagcgttctaagttgcctggatggatactttcgcat
ttacatgatgcccacctgaacttgagcacagatatggctttgcatatagcccgtgagttc
cttaggaagatggctcagccatatgataaagctggtggcagcggcaggaaaaccctattg
tcccaagaagacttggagaagatggttgagggcaacatgaatgatatgttctattga
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