Quillaja saponaria (soapbark tree): O6P43_007236
Help
Entry
O6P43_007236 CDS
T09778
Name
(GenBank) BRCT domain-containing protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O6P43_007236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsa03032
]
O6P43_007236
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_007236
DNA replication proteins [BR:
qsa03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
O6P43_007236
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
O6P43_007236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
zf-4CXXC_R1
Motif
Other DBs
NCBI-ProteinID:
KAJ7977643
UniProt:
A0AAD7QA02
LinkDB
All DBs
Position
3
Genome browser
AA seq
1282 aa
AA seq
DB search
MLETNYLSKMFLNVRFVLSGFDPISENKVRAKLVNCGGVDIGLYSQNCTHVIVDKLVYDD
PKCVAARNDGKTLVTALWVDHSFDLGMPVDATSIMYRPLKDLNGISGAKNLLICLTGYQR
QDRDDIMTMVDLMGAQFSKPLVANKVTHLICYKFEGEKYELAKRLKTIKLVNHRWLEDCL
RDWVLLPEEKYDKSGYELEMMEAEAKDSEEETEDATLRQSEGRRIDKSPQNLKTNIGNEY
RSDQLSRFLHVDDPNLSCQVLAISKDEAFGELPDVHFRTPDPRSNDVSKEVGCRNHCVSM
NASSVQLPDPDVGISESRKVGNDLTSSRSIERPSHSDAKVNAGSYSRNTSRRFTLPRYSE
ERSDDVIGHSKSPLGDLNYGDGDDLENLSSRMGKARDGISSPCIDGSQKGTDLVHGGESN
CRLPQKRISEVSYTNLKLPKVSPDGKLSDRSPAANCKTQESRPTSLSDCPETNDHFSAGN
GSYNLDHNANLSAAQNSKVTVSSSKTAPDTLKSMNVQDNNAYQKTPQTSIQSLSESFCNA
NLSAAQNSKFSVSTSKTSSITLKSMDVQDDSAYQKTPQTNMLSLSESIYKNPDIADGDMG
RNFHDVYEEQPQNEKQDVECASPINRTSEIESSGGIAHLNLCKEGSDNLVNKPPRKKMFA
KKSFASRSKLIDTANKKGAFYLSKTTSCDTGSRLSAQCEETGDYKKSLDADKLELYTPTV
DAETVSKEENVIKSKENAESRTDLMDDETEAPEDKVEYELEKVPDENKSEVVTLSKKAEI
RTEETSKSMPIVVKSDDGHALVEDQIGTEPQKAVCDRNVEMADSNLEGPGVKGKVNKVKK
RPMGKTKKRTTPVARGALKTKEAADEVEIQSETKDESEMETQKKALRPSRKNESYSSFEV
EKENKPVTDDGRNISHGKHCGDGKSAMKPRVKEKKTNIQKSKKTSLDLPSGKVQNLVKIE
PVCFILSGHRLQRKEFQQVIRRLKGRFCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASG
RWILKTDYLAASSQAGKFLQEEPYEWHKNGLSQDGAINMEAPRKWRLLRERTGHGAFYGM
RIIVYGDCIAPPLDTLKRVVKAGDGAILATAPPYTRFLDTGVDYAIVSPGMLRVDLWIQE
FLKHEIPCVVADYLVEYVCKPGFSLDRHVLYSTHTWAGRSYNKLQSIAEDIVEEFKPLDD
CDNSDITCQVCGSRDRGDVMLICGDEGGSVGCGVGTHIDCCDPPLHDIPDEDWFCPKCST
SKNCSNSSRKRKKVVSSTSKTK
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaacaaattatctatccaaaatgtttctcaatgttcgttttgtactatctggg
tttgatcctatcagcgaaaacaaggtccgagccaagcttgtaaactgtggcggagttgat
attggtctgtacagccaaaactgcacccatgtcattgtggataagcttgtatatgatgat
cccaaatgtgtagctgctcgaaatgatggcaagacgcttgtcacggcattgtgggttgac
cacagttttgatcttggaatgcctgttgatgccacttcaattatgtacagacctcttaaa
gatttgaatggaatatcgggtgccaaaaatttattgatatgcttaactggatatcagcgt
caagatcgggatgacattatgacaatggttgacttgatgggtgcacagttttctaagcca
ttggtggcaaacaaggttactcatctcatatgttacaaattcgaaggggagaagtatgag
cttgccaagagactgaaaacaataaagttagttaatcatcgatggttggaagactgctta
agagattgggtactgcttcctgaagaaaaatatgacaagagtggttatgaactagagatg
atggaggcagaggctaaggattctgaagaagagactgaggatgccaccttgaggcaatct
gagggaagaagaatagataagagtccccagaatctgaaaactaatataggaaatgagtat
agatctgatcagctatcaagatttcttcatgttgatgatccaaacttgagttgtcaggtt
ttggccatatctaaggatgaagcatttggtgaacttcctgatgtacatttcagaacccct
gatcctaggagtaatgatgtttcaaaagaagttggctgtcgcaatcattgtgtttctatg
aatgctagctctgttcagttgcctgacccagatgtcggcatttctgagtccaggaaggtg
ggaaatgacttaacatcttcaagaagtattgaaagaccctctcattctgatgctaaggtt
aatgctggaagttattctaggaatacctcaaggagattcacacttcctagatactcggaa
gagagatcagacgatgtaattggccattcaaagtcacctttgggcgatctgaattatggt
gatggtgatgacctagaaaatttgtccagcaggatggggaaggcaagggatggaatcagc
tctccttgtattgatggttcccagaaaggaactgatttagttcatggaggggagtcaaat
tgtagattgcctcaaaagaggataagtgaagtttcgtatactaatttgaaattaccgaag
gtaagtcctgatggaaagctcagtgacagaagcccagcagcaaattgtaaaactcaagaa
tcaagaccaacgtctcttagtgattgtcctgagactaacgaccatttttctgctggtaat
ggtagttataatctggatcataatgcaaatttaagtgctgcacagaactcaaaggttact
gtgtcatcttctaaaactgcacctgataccttgaaatcaatgaacgtgcaagacaataat
gcctatcagaagacacctcaaacatctattcagagcttaagtgagtctttctgtaatgct
aatttaagtgctgcacagaactcaaagtttagtgtgtcaacttctaaaacttcatccatc
accttgaagtcaatggatgtgcaggacgatagtgcctatcagaagacaccccaaacaaat
atgctgagcttaagtgagtctatttataaaaatcctgacattgcagatggtgacatgggc
agaaattttcatgatgtttatgaagaacagccacagaatgaaaagcaagatgttgagtgt
gcatctcctattaacagaacgtctgagattgaaagttccggtggcatagctcatttgaat
ttgtgcaaagaaggaagtgataacttagttaataaaccaccaagaaagaagatgtttgcc
aagaaaagttttgcttctagatctaaattaattgacactgctaacaagaaaggtgctttt
tacctaagtaaaactacatcttgtgatactggtagtagactttcagctcaatgtgaagag
acaggagattataagaagtctcttgatgccgataagcttgagttatacactccaactgtt
gacgctgaaacagtatcaaaagaagaaaatgttatcaaatcaaaagaaaatgcagaaagt
agaactgacttaatggatgatgaaacagaggctccagaagataaagttgaatatgagttg
gagaaagtacctgatgaaaacaaatctgaggtagttacattgtcaaagaaagcagagata
aggactgaagagacttcaaaaagcatgcccattgtagtgaagtcagatgatggacatgct
ttagttgaagaccaaattggaactgaaccacaaaaggcagtttgtgacaggaatgtggag
atggctgactccaacttagaagggcctggagtaaaaggaaaagtcaataaagttaaaaaa
cgtcctatgggtaaaaccaagaagagaaccactccagttgccagaggtgcattgaaaacc
aaggaagctgcagatgaggtagagattcagagtgagactaaagatgagtcagagatggaa
acacagaaaaaggcattacgtccttcacgtaaaaatgagagctacagttcttttgaagtg
gagaaggagaataaaccagtaactgatgatggtcgaaatataagtcatggaaaacattgt
ggtgatggaaagtcagccatgaaacctagagtaaaggaaaagaagaccaatattcagaag
tctaagaaaaccagtcttgacttgccatcaggaaaagttcagaatctagtgaaaatagaa
cctgtatgtttcatattgagtggacatcgccttcagagaaaggagtttcagcaggttata
aggcgtttaaaaggaagattttgccgggattctcatcagtggtcataccaggcaacacat
ttcatagcgccagatccaatacgcaggacagaaaagttttttgctgctgctgcatcagga
aggtggattcttaaaactgattacttagctgctagtagtcaggcaggaaagtttttgcaa
gaggagccttatgagtggcacaagaatggcctcagccaagatggtgccattaatatggag
gccccaagaaagtggagacttttgcgtgagagaactggtcatggtgccttttatggaatg
cgcattattgtatatggcgattgcattgcaccacctttggatactttgaagcgtgttgtc
aaagctggagatggggctatattagcaacagctcccccttacactcgtttccttgacact
ggagttgattatgctatagttagccccggtatgctgcgtgttgatttatggattcaagag
ttcttaaaacatgagataccatgtgttgtagctgattacttggttgagtatgtctgcaag
cctgggttttcccttgacagacatgtactttacagtactcatacttgggctgggaggtca
tacaataaactacagagtatagcagaagacattgttgaggagtttaagcctcttgatgat
tgtgataacagtgatataacatgccaagtctgcgggtcccgtgacagaggagatgtgatg
ctaatttgtggtgatgaaggtggttctgttggttgcggagttggcacacatattgattgc
tgtgatcctccgctccacgatattccagacgaggactggttttgtccgaaatgtagtact
agcaaaaactgctcaaactcttccaggaagaggaaaaaagtggtctcatctacatcaaag
actaagtaa
DBGET
integrated database retrieval system