Quillaja saponaria (soapbark tree): O6P43_007455
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Entry
O6P43_007455 CDS
T09778
Name
(GenBank) Pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_007455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_007455
Spliceosome [BR:
qsa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
O6P43_007455
Complex C
U4/U6.U5 tri-SnRNP related factors
O6P43_007455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-ProteinID:
KAJ7977899
UniProt:
A0AAD7QAF5
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All DBs
Position
3
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AA seq
385 aa
AA seq
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MANRTDPTAKSIRGTNPQNLVEKILRSKIYQTTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLTMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGVDTDVYHYL
EPLYNDYRKLRRKLADGNFTLTHVDEVIDELLTKDYSCDIALPRIKKRMTLVSLKLLEER
RSALEEDFEEEEEKEENILPVDESEEGAYEKEYYRGRSPARDRNRDRRRDSHRYRDRDYD
RDYDRERERGRGQERDRDRDRERDRDHHRVREERDYGRERDGRERERRDRDRDRGRRRSY
SRSRSRSRDHKDREGGEYRKRHARTSTSPRRNGDAIEDGSTREESRKKKEKKEKKEKKDD
GTDHPDPEIAEANRLRASLGLKPLK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggaccctacagcgaagagcataagaggaacaaaccctcagaacctg
gtggagaagattcttcgatccaaaatctaccaaactacatactggaaggaacaatgtttt
ggattaactgcagagaccttggtcgacaaggccatggagctcgaccaccttggtggaacc
tatggtggcaaccgcaagcccacgcctttcatgtgcctcaccatgaagatgcttcagatt
cagcccgagaaggaaatcgtaatcgaattcatcaagaacgaagattacaaatatgtgagg
gtgctcggtgcattttatttgcgtcttactggggttgatactgacgtgtaccactacctg
gagcctctatataatgactaccgcaagttgagacgaaaattagctgatggaaattttact
ctgacacatgtggatgaggttattgatgaacttctaacaaaggattactcgtgtgacatt
gctttaccacgtattaagaaaagaatgacccttgtgtcactcaaattactggaagaaaga
agaagtgcgttagaagaggattttgaggaggaagaagagaaagaagagaatatactacct
gtagatgagtcagaagaaggggcatatgaaaaggagtattaccgtgggcgaagccctgca
agggatagaaatagggacagaagacgtgatagtcatagatacagggatcgggactatgat
agagactatgatagagaacgtgaacgtggacgtggccaagaaagggacagagacagggat
agggagagagatagagaccatcatcgggtgagggaagaaagggactatggacgtgagagg
gatggcagggagcgggagaggagagacagagaccgggaccgtggaaggcgacggagctac
tcaaggagtcgaagtaggagtagagatcataaagatcgtgagggtggggagtaccgcaag
agacatgctcgcaccagcacaagccctagaaggaacggggatgcaattgaggacggtagt
actcgagaagagtccagaaagaagaaggaaaagaaggagaagaaggaaaagaaagatgat
ggaactgaccaccctgatccagagattgcagaagccaacaggttacgagcttctctcggg
ttgaaaccattgaagtaa
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