KEGG   Quillaja saponaria (soapbark tree): O6P43_007455
Entry
O6P43_007455      CDS       T09778                                 
Name
(GenBank) Pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    O6P43_007455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsa03041]
    O6P43_007455
Spliceosome [BR:qsa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    O6P43_007455
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    O6P43_007455
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-ProteinID: KAJ7977899
UniProt: A0AAD7QAF5
LinkDB
Position
3
AA seq 385 aa
MANRTDPTAKSIRGTNPQNLVEKILRSKIYQTTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLTMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGVDTDVYHYL
EPLYNDYRKLRRKLADGNFTLTHVDEVIDELLTKDYSCDIALPRIKKRMTLVSLKLLEER
RSALEEDFEEEEEKEENILPVDESEEGAYEKEYYRGRSPARDRNRDRRRDSHRYRDRDYD
RDYDRERERGRGQERDRDRDRERDRDHHRVREERDYGRERDGRERERRDRDRDRGRRRSY
SRSRSRSRDHKDREGGEYRKRHARTSTSPRRNGDAIEDGSTREESRKKKEKKEKKEKKDD
GTDHPDPEIAEANRLRASLGLKPLK
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggcgaaccgtacggaccctacagcgaagagcataagaggaacaaaccctcagaacctg
gtggagaagattcttcgatccaaaatctaccaaactacatactggaaggaacaatgtttt
ggattaactgcagagaccttggtcgacaaggccatggagctcgaccaccttggtggaacc
tatggtggcaaccgcaagcccacgcctttcatgtgcctcaccatgaagatgcttcagatt
cagcccgagaaggaaatcgtaatcgaattcatcaagaacgaagattacaaatatgtgagg
gtgctcggtgcattttatttgcgtcttactggggttgatactgacgtgtaccactacctg
gagcctctatataatgactaccgcaagttgagacgaaaattagctgatggaaattttact
ctgacacatgtggatgaggttattgatgaacttctaacaaaggattactcgtgtgacatt
gctttaccacgtattaagaaaagaatgacccttgtgtcactcaaattactggaagaaaga
agaagtgcgttagaagaggattttgaggaggaagaagagaaagaagagaatatactacct
gtagatgagtcagaagaaggggcatatgaaaaggagtattaccgtgggcgaagccctgca
agggatagaaatagggacagaagacgtgatagtcatagatacagggatcgggactatgat
agagactatgatagagaacgtgaacgtggacgtggccaagaaagggacagagacagggat
agggagagagatagagaccatcatcgggtgagggaagaaagggactatggacgtgagagg
gatggcagggagcgggagaggagagacagagaccgggaccgtggaaggcgacggagctac
tcaaggagtcgaagtaggagtagagatcataaagatcgtgagggtggggagtaccgcaag
agacatgctcgcaccagcacaagccctagaaggaacggggatgcaattgaggacggtagt
actcgagaagagtccagaaagaagaaggaaaagaaggagaagaaggaaaagaaagatgat
ggaactgaccaccctgatccagagattgcagaagccaacaggttacgagcttctctcggg
ttgaaaccattgaagtaa

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