KEGG   Quillaja saponaria (soapbark tree): O6P43_007689
Entry
O6P43_007689      CDS       T09778                                 
Name
(GenBank) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
qsa  Quillaja saponaria (soapbark tree)
Pathway
qsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:qsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O6P43_007689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsa03019]
    O6P43_007689
Messenger RNA biogenesis [BR:qsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     O6P43_007689
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     O6P43_007689
SSDB
Motif
Pfam: EXOSC1 ECR1_N ECR1_N_2 RRP4_S1
Other DBs
NCBI-ProteinID: KAJ7978185
UniProt: A0AAD7QBE0
LinkDB
Position
3
AA seq 197 aa
MQEGKEPPLVTPGEVLGRASDVKPGIGAYVASHNDTVYASLTGFLRTISPSADSPDQRPT
VEVTGHKAHGAVPVPGSVVIARVTKVMARMASADIMCVGPKNVQEKFTGTIRQQDVRATE
IDKVDMHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESTAGATMVPVSWTEMQ
CPLTGQIEQRKVAKVGS
NT seq 594 nt   +upstreamnt  +downstreamnt
atgcaagaagggaaagagccgccattggtaacgccaggagaagtgctgggtcgagcttcg
gatgtgaaacccgggattggtgcatatgtggcgtctcacaacgatacagtctacgcttct
ctcactggtttcctccgtaccatatctccttctgccgattctcctgaccagagaccaact
gttgaagtaactggtcataaggcacacggtgctgttccagtgcctgggtctgtcgtcatt
gcccgagttacgaaagtgatggctaggatggcatctgctgatattatgtgtgttggcccc
aagaatgtgcaagaaaaatttactgggacaattaggcaacaagatgtaagagcaactgag
attgacaaagtggatatgcacttatcttttcgccctggtgacattgttagagcacttgtg
ctttccctcggagatgcgcgggcatactatttatccactgcaaagaatgaactcggtgtt
gtgtctgcagagagcactgctggtgcaactatggttccagtaagttggacagagatgcaa
tgcccattaactggccaaattgagcaaagaaaggtcgcaaaggtgggaagctga

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