Quillaja saponaria (soapbark tree): O6P43_007689
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Entry
O6P43_007689 CDS
T09778
Name
(GenBank) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_007689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_007689
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
O6P43_007689
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
O6P43_007689
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
Motif
Other DBs
NCBI-ProteinID:
KAJ7978185
UniProt:
A0AAD7QBE0
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All DBs
Position
3
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AA seq
197 aa
AA seq
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MQEGKEPPLVTPGEVLGRASDVKPGIGAYVASHNDTVYASLTGFLRTISPSADSPDQRPT
VEVTGHKAHGAVPVPGSVVIARVTKVMARMASADIMCVGPKNVQEKFTGTIRQQDVRATE
IDKVDMHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESTAGATMVPVSWTEMQ
CPLTGQIEQRKVAKVGS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagggaaagagccgccattggtaacgccaggagaagtgctgggtcgagcttcg
gatgtgaaacccgggattggtgcatatgtggcgtctcacaacgatacagtctacgcttct
ctcactggtttcctccgtaccatatctccttctgccgattctcctgaccagagaccaact
gttgaagtaactggtcataaggcacacggtgctgttccagtgcctgggtctgtcgtcatt
gcccgagttacgaaagtgatggctaggatggcatctgctgatattatgtgtgttggcccc
aagaatgtgcaagaaaaatttactgggacaattaggcaacaagatgtaagagcaactgag
attgacaaagtggatatgcacttatcttttcgccctggtgacattgttagagcacttgtg
ctttccctcggagatgcgcgggcatactatttatccactgcaaagaatgaactcggtgtt
gtgtctgcagagagcactgctggtgcaactatggttccagtaagttggacagagatgcaa
tgcccattaactggccaaattgagcaaagaaaggtcgcaaaggtgggaagctga
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