Quillaja saponaria (soapbark tree): O6P43_008232
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Entry
O6P43_008232 CDS
T09778
Name
(GenBank) Pre-mRNA cleavage factor Im subunit like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
O6P43_008232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_008232
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
O6P43_008232
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Ortholog
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GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-ProteinID:
KAJ7969975
UniProt:
A0AAD7PWY5
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All DBs
Position
4:complement(2736672..2740027)
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AA seq
200 aa
AA seq
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MVSSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGLRTSVEAILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSAAHVPEWQIGECVATWW
RPNFETIMYPYCPPHITKPKECKKLFIVHLSEKAYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMITN
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgtctgcgatagtcaacacatacccactctcgagctacacctttggaacgaag
gagccgaagatggagaaggacacttctgtcgctgatcgcctagctcgtatgaaagtcaat
tacatgaaagagggattgaggacaagtgtcgaagccattttactggtacaagagcataat
catcctcacatacttcttctacaaattggaaacacattctgcaaacttccaggcgggcgt
ttaaagccaggagaaaatgagattgagggcctgaaaagaaagttaaccagcaagcttggt
gctaattcagctgctcatgtgccagagtggcagataggggaatgtgttgcaacctggtgg
aggccaaatttcgagaccattatgtatccatattgccctcctcacattacaaaaccaaag
gagtgcaaaaagcttttcattgttcacttgtctgagaaggcatactttgcggtaccaaaa
aatttgaaacttcttgctgttccattgtttgagctctacgataatgttcagagatatgga
ccagttatatccacaattcctcagcagctttctagattccagttcaacatgatcactaat
tga
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