Quillaja saponaria (soapbark tree): O6P43_008295
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Entry
O6P43_008295 CDS
T09778
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_008295
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_008295
Enzymes [BR:
qsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O6P43_008295
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
Pre-60S particles
Helicases
O6P43_008295
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
O6P43_008295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7970049
UniProt:
A0AAD7PWK8
LinkDB
All DBs
Position
4
Genome browser
AA seq
716 aa
AA seq
DB search
MASVPLSESPKDKKEKKKKKMKNQTLIEASETEGSVGKKSKKEFKLKHNPKASDSDEEEV
YENNMKKKKKKKNESKKRKASDSEVMMNGNEERSETSSELVEPVNDKKKKAKLEEIDQEK
KEVVKAEDPNAISKFRISEPLRAKLKDKGIESLFPIQAMTFDTVLDGSDLVGRARTGQGK
TLAFVLPILESLTNGPAKAARKTGYGKAPSVIVLLPTRELAKQVHSDFEVYGGALGLTSC
CLYGGAPYSAQEIKLRRGVDIVVGTPGRIKDHIERQNIDLSSLKFRVLDEADEMLRMGFV
EDVELILGKVEDVSKVQTLLFSATLPDWVKKISTKFLKRDKKTADLVGNEKMKASINVRH
IVLPCSRSARSQLIPDIIRCYSSGGRTIIFTETKESASELAGLLHGAKALHGDIQQSQRE
VTLSGFRSGKFLILVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVA
VMLYDPRKSNVSMIERESGVKFEHISAPQPADIAKAVGGEAAELITQVSDSVIPAFKSAA
EELLSTSSLSAVELLAKALAKAVGYTEVKKRSLLNSMENHVTLLFEIGRPIYTPSYAYGV
LRRFLPEEKVESVKGLTLTADGNGAVFDVTAEDLDLFLTGQQNAANVILEVVKALPPLQE
RDQSRGVNRFGRDGFGGRSTGNRFGRDADRFSGQRNDRFTNGFKGRRGGGNRGNKW
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggtacctctgtctgagagccccaaagacaagaaggagaagaagaagaagaag
atgaagaaccaaactttaattgaagcttcagaaactgaaggttcagttggcaagaagagt
aaaaaagagttcaagcttaaacataatcccaaggcatctgattctgatgaagaggaagtt
tacgagaacaatatgaagaagaagaagaagaagaagaatgagagtaagaagcgtaaagct
tcggactctgaggttatgatgaatgggaatgaagagaggagtgagaccagctcggagctg
gttgagccggttaatgacaagaagaagaaagccaagttggaggagattgatcaggaaaag
aaggaggttgtgaaggctgaggatcccaatgcaatttcgaaatttaggatatcggagccg
ttaagggcaaagttgaaagataagggaattgaatcactgtttccaatccaggctatgact
tttgatactgttcttgatgggtctgatttggttggtcgggcgcgcactggtcagggtaaa
acactggcatttgtgttgcccatactggagtccttaactaatggtcctgcaaaagctgca
cgaaagactggatatgggaaagcaccgagtgttattgtacttttacctaccagggaattg
gccaagcaggtacattccgactttgaagtttatggtggagcattaggattgacttcttgc
tgtctgtatggtggagctccatacagtgctcaagaaattaaactcaggagaggggttgat
attgttgttggaacacctggacgcataaaggatcatatagagagacaaaatattgacttg
agctcattaaagttccgggtccttgatgaggctgatgagatgctgaggatgggttttgtg
gaagatgttgaactcattctaggcaaggtagaggatgtaagtaaagttcagacacttctt
tttagtgctactttgcctgactgggttaagaagatttctactaaatttcttaaacgcgac
aagaaaactgctgaccttgttggtaacgagaaaatgaaggccagcataaatgtcaggcat
attgttcttccttgttctaggtctgcaagatcacagcttatcccagacattattcgttgt
tacagtagcggaggccggacaattatattcactgagacaaaggagtctgcttccgagctt
gcaggcctgttacatggagcaaaagctttacatggtgacatacagcaatcacagcgggag
gtgacattgtctggtttcagatcaggaaagttcttgattctagtggccacaaatgtagca
gctcgcggattggatattaatgatgtccagttaattatccagtgtgagcctccacgtgat
gtagaagcctatatccatcgatctggacgtacaggaagagcaggtaatactggagttgct
gtaatgctttatgatccaagaaagtcaaatgtatctatgatagaaagagaatcgggtgtg
aagttcgagcacatatctgctcctcagccagctgatattgccaaagctgttggtggggag
gctgctgaattgataacccaggtgtctgatagtgtgattcctgcatttaagtctgctgct
gaggagctgctgagtacctccagtttatcagcagttgaattacttgcaaaagctcttgca
aaggctgttggttatactgaggtaaagaaaagatcacttctcaattctatggagaaccat
gtcacgttactttttgagattggtagacctatctacaccccatcgtatgcatatggagtc
ctgcgaagattcttgccagaggagaaggttgagtcagtgaagggtcttactctgactgct
gatggaaatggtgctgtgtttgatgtgacagctgaagatttggatttgtttcttactggt
caacaaaatgcagctaatgtgatcttagaggtagtaaaagcattgccgcccttgcaagaa
agggaccagtcaagaggggttaataggtttggaagagatggctttggtggtagaagcact
ggtaataggtttggaagagatgctgatagattttctggtcaaagaaatgatcggttcacc
aatggttttaaaggcaggagaggtggcggcaacaggggaaataaatggtga
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