Quillaja saponaria (soapbark tree): O6P43_008897
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Entry
O6P43_008897 CDS
T09778
Name
(GenBank) WD40 repeat
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsa03009
]
O6P43_008897
Ribosome biogenesis [BR:
qsa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
O6P43_008897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WDR54
Motif
Other DBs
NCBI-ProteinID:
KAJ7970768
UniProt:
A0AAD7PWU5
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Position
4:complement(7458858..7465272)
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AA seq
535 aa
AA seq
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MGVKQENGTLIKPSTEEETPNELDLKVKKYLRGDGANLEVLQDKKLKGQLAVREGLYKQS
ANAAAKAEKWLMPSEGGYLEAEGIEKTWRIKQESIAREVDILSSRNQYDIILPELGPYTL
DFTSSGRYMALAGRKGHIGIVDVKQMNLIREFQVRETVRDVVFLHNELFFAAAQKKYPYI
YNRDGTELHCLKEHGAVLRLQFLKNHFLLASINKFGHLHYQDITMGSMVGNFRTGLGRTD
VMQVNPFNGVVALGHSGGRVTMWKPTSSSPLVSMLCHHGPVSALAFHSNGHLMATAGKEK
KIKLWDLRKFEVLQTLPGHANTLDFSQKGLLACGTGSFVQVLGDFSATQNYSRYMTHSMV
KGYQIKELVFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVRSL
LDKLPPETIMLDPRKIGTVHSAKKKEKATKQEREAEMENAVEAVKGINLKNKTKGRNKPT
KKLKKKQEIIAKAKRPYLDQQMKEEEEIAKKKQKVSQEVELPKSLQRFSNKKAAS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaagcaggaaaatggaactctgattaagccttcaactgaagaggaaactcct
aatgagctagatctgaaagtaaagaagtatctcagaggagatggtgctaatttggaggtt
ttgcaagataaaaagctcaagggtcaacttgctgttagagaaggattatataaacaatct
gcaaatgctgcggccaaggctgagaaatggcttatgccaagcgaggggggctatttggag
gccgaaggcatagagaagacatggaggattaaacaagaatcaattgctcgtgaagtagat
atattaagctcaaggaatcaatatgatattatattaccagagcttggtccatacacattg
gattttacctccagtggccgatatatggctcttgcaggacggaagggtcatattggcatt
gtagacgtgaagcaaatgaacctgataagagagtttcaggtcagagaaacagtgcgtgat
gtggtatttttgcacaacgagttgttcttcgctgctgctcagaaaaagtatccttatatt
tataaccgggatggcacagagcttcactgcctaaaggaacatggtgcagtattaaggctt
cagtttctgaaaaaccacttcctcttggcatcaattaacaaatttgggcatcttcattat
caggacattacaatgggttcaatggtaggcaatttccgaactggtttaggacgtactgac
gtaatgcaagtgaatcccttcaatggggtcgttgctttgggtcactctggtggtagagtt
actatgtggaagcctaccagctcttctcctcttgtcagtatgctttgtcatcatgggcct
gtgtcagcactggcattccattcaaatggccatctgatggccactgctgggaaagagaaa
aaaattaagctgtgggacttacgaaaatttgaggttctccaaaccttaccaggccatgcg
aataccttggattttagtcagaaaggtttgcttgcttgtggtactggttcatttgtacag
gtattgggtgatttttctgctactcagaattatagtagatatatgactcattccatggtg
aaaggttaccagataaaagaactagtatttcgaccatatgaagatgttcttggcatagga
cactcaatgggttggtctagtattcttattcctggatcaggcgaacctaacttcgattct
tgggtggcaaacccatttgaaacatctaaacagaggagagaaaaggaagtgcgctctctt
cttgacaagcttccacctgagacaattatgttggatccgagaaagattggtacagtgcac
tcagcaaagaagaaagagaaggcaactaaacaagagagagaggctgagatggaaaatgct
gttgaagctgttaagggcattaacctaaagaataaaacaaaagggaggaataagcctact
aagaagctaaagaagaaacaggaaataattgcaaaagcaaagagaccttacttagatcaa
caaatgaaggaggaagaagaaattgccaaaaagaagcagaaagttagccaggaagttgaa
ctaccaaaatctttgcagcgattttctaataagaaagcagcttcatga
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