Quillaja saponaria (soapbark tree): O6P43_008923
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Entry
O6P43_008923 CDS
T09778
Name
(GenBank) Protein RST1
KO
K27498
focadhesin
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_008923
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
O6P43_008923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-ProteinID:
KAJ7970795
UniProt:
A0AAD7M922
LinkDB
All DBs
Position
4
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AA seq
1854 aa
AA seq
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MESYSPLLEKTRVPQPSLQKFAVISIFSKLRSAPKYLDSESEPGREAISQCLNSTFPAVV
DQSVRELCRLVKDSHMDISRGMLELQSALEGTDPKFVVVFVKALGFLVRFGFQKNNGLWQ
FSSTETHPFVKVLSSRTEAHSELVTQVLLFMVQNKQLGMVEVCEFLRPLLYFSILRMPFS
DSSSSSLAMQLISSMASFCCTFPFESFPVFKLLMRGLKYVPYSNSQEFRKLISFAEIMVD
AYIVVIRLLSEKRSQLVTEAQLCGIELLKTILPLLTCVHRHPGGNQPICELSNRLLSVQK
DLGLRYIPALSSILLSLFVILVQSELEHEQLSILMLVLFVLKWKHENEYAIDRTKAAPVE
ELLFIFPAINLMSSPSKSIKGPAAELLVTLEKLLVKVLETWKDEPTLEEGVCYVSSPGSI
VLRLLRHLWCQDQGSPSSHFILNFGSNSKSEGKMMHVPRSWTSQLREYCLSIVDRRKSSL
PLSQSQESFVTEMPFLLSAVVGVLLMHPSLGATALDSLAALGVMDPKLGVPLLLTILFYS
NIFTTKNVISCDMLLKLLGMLPSLASHSAMIPLIVQTILPMLNKDAKPTLYATATRLLCR
TWEINDRAFGSLHGVLLPKGLVEFKTERNICISIAASVRDVCCKNPDRGVDLILSVSACI
ESQDPAVKALGFQSLAHLCEEDVIDFYTAWNVIAKHVGDYYTDPVLAHSICLLLRWGAMD
AEAYAETSKGVLQILWGIVTYTHPSHELIWAKARTSALEALTQYEVPHLENNIPDFRKRN
LELFFSETNPNVLRAMEDFQVKIIIYEHNTRRRLVKEKRVLRSKIEKLLDVFPQLIFSSG
KPSEAGGLPGAALLCISFTPKNPNNLQASKRLRDVHAAYENALVEIAESLQLSRNIFVAL
ITLQSWKSFMRRWMRADIFLFDAKAHSNVLDRTSKAATDILKSMIMKAEEAIPRSAENIA
LAIGALCLVLPPSAHTIKSAASKFLLDWLLQHEHEHRQWSAAISLGLISSYLHVTDHKLR
YQNITALLEVLGGSKSALVKGACGVGLGFACQDLLTRVEAAENSDLEKGKDNVPEAELLG
GIVRALSMAICQLTQSSSDILESLCSFSLLHTYETNTSKMSELSYKDCDYLEEDIWGVAG
LVFGLASSTSAIYRAGEQEAVLKIKSLFVSWIPHVNALVQSTGAVDESERLLSVGSCIAT
PIVVAFCQRVELMDDIELEKLVYGYKELISELTSIKKSDILHQSLLMASCIGAGTLLGCI
LNEGVLSIEVECVKGLLELFRKCYSNPYPPLIHLGGMFGVVNATGAGAGILVDMHLPSST
MQHGYEQKESSYVRGPLLSSSVFQLHLTSLVQEMFLVAQNSDDHQLQHYASWAVSFLRHR
IWSNELPIVDNDTNADKANLKSVSQSFAEDNVVMKLSSWLMSLNCTGMSTIAHVETVATV
LRCLSRAPRLPSLDWGAVIRRCMKYETQVAKLLPSDSVHKKGTLRVECVQFSLAHAPQFD
PLLTFLDELSDLSRFRTLELNLQSCLLIHLSDLMKVYSGSRLEKLFDDVINHLFSVTQFQ
VCEASQKSLLRVSCWKGLNQSLDEISIDRLDCISHVERCMEALFTLLPTLESSASEVVSQ
VNSVEEWSEAVKCLEKAPRRWLLDFLQEDPLQRGGWFIEVQKKVHVKVKLVKTGSLPLIE
LGKLKSDILNSKLQGIWDILIEFVAALQHAEGVVKRQWLVDAVEISCVSRYPSTALQFLG
LLSSTCCKYMPILILDQQTVLSDLPVTLTSLLSDSSWEVVAETVSSHLYSSTERIYNWAT
QTACGNYMPGMQPIDKSEENMAAFLLQVLHHTCVLLKSYLSLDKQLRLTNMVVD
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtattctcctctactggaaaagacgcgagtccctcaaccgtcacttcaaaaa
ttcgctgtaatttcaattttctccaagctccggtctgccccgaagtatctagactccgaa
tccgaacccggaagagaagcaatctctcaatgcctgaactccacctttccggctgtcgtc
gatcaatctgttcgcgaattatgccgtctcgtgaaagattctcatatggatatttctcgc
gggatgctggagcttcagtctgctttggaaggaaccgacccaaaatttgttgttgttttt
gtaaaagctttgggctttcttgtccgctttgggtttcagaaaaacaatgggttgtggcag
ttcagttcaacggagactcacccttttgttaaggtactgtcaagtcgaacagaagctcac
tcagaactcgttacacaagtgttgctgtttatggtgcagaataagcaattggggatggtg
gaagtttgtgaattcctgagacccttactatatttttcaattttacggatgcctttttca
gattcatcatcgtcttcccttgcaatgcaattgatatcatcaatggcatctttttgttgc
acatttccttttgagtccttccctgtttttaagctgctaatgaggggccttaaatatgta
ccatacagcaactcacaagagttcaggaaattaatatcttttgctgagattatggtggat
gcatatattgtggttatcagattattatctgaaaagagatcacagctggttacagaggct
caactttgtggtattgaactcctcaaaacaatccttcctttgttgacatgtgttcataga
catcctggtggcaatcagcccatatgtgaactgtcaaatcgcttattgtctgtccaaaag
gatcttgggttgcggtatatccctgcattatcttcaattctgctatctttatttgtaatc
cttgttcagtcagagcttgaacatgaacagctttccatattaatgctcgtcctctttgtc
ctgaagtggaaacatgaaaatgaatatgctattgacagaactaaagctgctccagttgaa
gaacttttatttatatttcctgccataaaccttatgtcatctccttccaaatcaattaaa
ggtccagcagctgaattgcttgtcacgttagaaaagctcttggttaaagtactggaaact
tggaaggatgaaccaaccttggaagagggtgtttgttatgtcagctctcctggatctata
gttcttaggcttttgcggcatctttggtgtcaggatcagggatcaccatctagccatttc
atactgaacttcggttcaaacagtaaaagtgagggcaaaatgatgcatgtaccaagatct
tggacttcccaattaagagaatactgtttatccattgttgacagacgaaaatcttcccta
cctctgtctcagtctcaggaatcttttgttactgaaatgccctttctactcagtgctgtt
gttggtgttttgttgatgcatccatcattgggggctactgctctagattctttggctgct
cttggtgttatggacccgaaactgggagttcctttgttgctaactattcttttctacagt
aacatattcaccacaaaaaatgttataagctgtgatatgctgctaaaacttttaggaatg
cttccatcacttgcttcgcattctgcaatgattccactcatagtgcaaactatcttgcct
atgcttaacaaagatgcaaaacctacattatatgccacagccactcgtttgctttgtcga
acctgggagatcaatgatcgtgcttttgggagtttgcatggggtcttgcttcctaaagga
ttggtggaattcaagactgagagaaatatctgtatcagtatagctgcttctgtgcgggat
gtttgctgtaaaaaccccgacaggggtgttgaccttatcttgtctgtttcggcttgcatt
gaaagccaagaccctgcagttaaagctcttggttttcaaagccttgcccacctttgtgaa
gaggatgtaattgatttttatactgcttggaatgtcattgcaaagcatgttggagactac
tatactgacccagttcttgcacatagcatttgccttctattgaggtggggtgcaatggat
gctgaagcatatgcagaaacttcaaaaggcgtgctgcaaattttgtggggaatagttacc
tatactcaccctagtcatgagctaatttgggcaaaggcaagaacctctgccttggaggcc
cttacccaatatgaggtaccacatcttgaaaacaatattccggattttcgtaaaaggaac
ttggagttattcttttccgagacaaatcccaatgtactcagggcaatggaggactttcaa
gtcaaaatcataatctacgagcacaacacacggcgaagattggtcaaggagaaaagggtc
ctacgaagcaagattgaaaagctgttggatgtgtttccgcagcttatcttctcttcaggg
aaaccaagtgaagctggaggattacctggtgctgctttattgtgcatttccttcactcct
aaaaatccaaacaacctacaggcatccaagagattacgagatgtacatgctgcttatgag
aatgcactagtggaaatagcagaatctcttcagctctcaagaaatatttttgtcgcactt
attacactgcaatcatggaaatctttcatgagacgttggatgagggctgatatttttctg
tttgatgctaaagcacattcaaatgtgctcgatagaacttctaaagctgctactgacatt
ctaaaaagtatgataatgaaagcagaagaagccattcctagatctgctgaaaatattgca
ctagctattggtgcactctgtttggtcttgcctccatctgctcacactattaagtcagcc
gcttctaagttccttttggattggttactccagcatgaacatgaacaccgccagtggtca
gctgcaatttctcttgggttaatctcaagttacctccatgtaactgaccataagctgaga
taccaaaatatcactgcacttcttgaggttctgggtggtagcaaaagtgcccttgttaaa
ggagcatgtggggttggcttgggttttgcatgccaagaccttcttaccagggttgaagcc
gctgaaaattctgacttggagaaaggaaaagataatgtacctgaagctgagttactaggg
ggaatagttagggccttatcaatggcaatatgtcagctcactcaatcttcatctgatatt
ctggaaagtctctgttcattctcactgttacacacatatgagacaaatacaagtaaaatg
tctgagctgtcatacaaggactgtgattacttggaggaggacatctggggtgttgctgga
cttgtttttggtttggcaagctccaccagtgcaatatacagagctggtgagcaagaggct
gtactcaagataaaaagcttatttgtatcatggattccacatgtgaatgcactagttcaa
agtactggtgctgttgatgaatctgaaagacttttatcagtaggatcctgcattgcaaca
cccattgtagtggctttttgccagagagtggaattgatggatgacattgaattggaaaag
ctagtatatggctataaggagttgatttctgagttgacctctattaaaaaatctgacatt
ttgcatcagagcttgcttatggcatcatgcattggagcagggacgctccttggttgtata
ctaaatgaaggggtgctttctattgaggttgagtgtgttaaaggtttgctggaactgttt
agaaaatgttactccaatccttaccctcctctcattcatctgggtgggatgtttggagtt
gttaacgctacgggagcaggtgctgggattttggtcgatatgcaccttccaagttctaca
atgcaacatggttatgagcagaaggagtcttcgtatgtcaggggtcctctactttcaagt
tctgttttccagttacatttgacatcattggtgcaagaaatgtttctagtggcacagaat
tctgatgatcatcaactgcaacattatgcatcttgggcagtttcatttcttcgacatcgt
atctggtccaatgaacttccaattgttgataatgatactaacgctgacaaagctaattta
aaatctgtttctcaaagttttgcggaggacaatgtggttatgaagctctcttcgtggctt
atgtctctgaattgtactgggatgagtactattgcacatgttgaaactgtggcaactgtt
ttaaggtgcctttcacgagctcccaggttgccgagcctggactggggagcagtaattagg
cgctgcatgaaatatgagactcaggttgctaagttgttgccatcagactcagttcataag
aaaggaactctcagggtggagtgcgtacagttttcattagcccatgcacctcaatttgat
ccacttctaacttttcttgatgagctttcagacctgtccaggttcaggacacttgagctg
aatctgcagtcatgtctgcttattcatctctcagaccttatgaaagtatattcaggctcc
aggcttgagaaattatttgatgatgtgattaatcacttgttttcagttacccaattccaa
gtctgtgaggccagtcagaaaagcctgctacgggtttcatgctggaagggcctcaatcaa
tctctagatgaaatctccattgacaggcttgattgcatatcccatgttgaaaggtgcatg
gaggcgttatttaccttgttgccaacactggaatcaagtgccagtgaagtagttagccag
gtaaattctgtagaggagtggtctgaggctgtgaaatgcttggagaaggcgccacggaga
tggttgttggatttcctacaggaggatcctctacaacgaggtggctggtttattgaagtc
caaaaaaaggtccatgtcaaggtgaagctagttaagaccggttctcttccattgatcgag
ctgggaaagttaaaatccgatatattgaactccaaactgcaaggtatttgggacatactg
attgaatttgtagcagctttgcaacatgcggagggagttgtcaagagacaatggcttgtt
gatgcggtggaaattagctgtgtatcacgctacccttccacggcactgcagtttcttggt
ctgctatccagtacatgctgcaaatatatgcccattctgattctggaccaacaaacagtg
ctgagtgatttaccagttacacttacttctcttttgtcagactccagttgggaagttgtt
gcagagactgtttcttctcatctctattcatctacagagcgcatatacaactgggccaca
cagacagcatgtggtaattatatgcctggaatgcaacctattgataaaagtgaggaaaat
atggctgcttttttactgcaagtgctgcatcatacttgtgtgttattaaaaagctacttg
tctttagataagcagcttaggctcactaacatggtggttgattga
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