Quillaja saponaria (soapbark tree): O6P43_008924
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Entry
O6P43_008924 CDS
T09778
Name
(GenBank) Zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qsa01009
]
O6P43_008924
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_008924
03041 Spliceosome [BR:
qsa03041
]
O6P43_008924
Protein phosphatases and associated proteins [BR:
qsa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
O6P43_008924
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
O6P43_008924
Spliceosome [BR:
qsa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
O6P43_008924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-ProteinID:
KAJ7970796
UniProt:
A0AAD7PWH3
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All DBs
Position
4
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AA seq
945 aa
AA seq
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MELKISTPKPGCLSPSDFVSEPEEKEVSDDDDDDRNHKHRRRDIRSQSSERDAIESVMSK
PFKKHSKAFGNRHIFRENESQGSENLSTYNNASAGREFSSKFDRRRLGVTMLPRAPLDLS
QRTWANQTFAGDHGPGKGRGRDSGSWNQRDSRFNSNDVASQMVQQGSIPPIMYTGRGLPN
VSNAQSASWNGFGILPGIPNGGLDMIHSIGLQGTLRPPINSSLNMGIPRQRCRDFEERGF
CLRGDICPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLLGTAAGSGPLQSLSASAPSMNI
KSIHGKANKPRLGDEVLGLNGAYPGSSCAGGADLYDPDQPLWNNSGPETSNALLTVQSPK
ADETESFPNDASSDRQHVRLYDSVDNDCPVGTSATAIGLHSASLSVWGRIGSSNNRFDVK
EKVNSTPITFPYLESGLEEEKDELTGFHGDSRPRKQTIADDAGQKSMDSSSRPQGDSMRN
SRKPSQKAVRTLFVNGIPLKSNKRDSLLSHFQKFGEVMDIYIPLNSERAFVQFSKREEAE
AALKSPDAVMGNRFIKLWWANRDNIPDDAFSSGTGVSEIFHGVAPASVPFHPAVSSRGKD
TLHQSAILKIISDELPASDHPKPVILNGPKVPPPIQKKLENLEQLKEEIRKKQEMLEQKR
TNFRRQLDKLEKQATGVKGEIVTEQAAKRPKVCTSADIAKSASPRSSDSVCTAVSPHAKA
MVDKKKSAETTVTHSPKTITTMVVQESTGLKQPIHSLTPVASPILINRYKLDNRPTVFRI
IPPLPAGLANVAVLKEHFLLHGDLSDVELEGLPVHDGSSESEASPHYSARITFTTRHAAE
RAFANGKCWKGHNLKFMWLTSSTSSNGHGHREKSQSAPEETLDTDVSLEEKLECNVSQEA
PASGDGEPIASATASGFVQAEPSEASQCTPCPASCEKESPEGNLC
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaaatttcaactccaaaaccaggctgcctttcgccatctgattttgtcagt
gaacctgaggagaaggaagtcagtgatgatgatgatgatgatcggaatcataagcatcgt
aggagggacatccgttcccaatcttcggagagggatgctatagaatcagttatgtctaag
ccattcaagaagcacagcaaagcttttggaaatcggcatattttcagggaaaatgaatct
caaggaagtgaaaatctgagtacttacaacaatgcttctgcagggagagaattctcctca
aagtttgatagaagacgccttggtgtgacaatgctccctcgagcacctttggatttaagt
caaagaacatgggcaaaccaaacatttgctggagatcatggccctggcaaaggaagaggc
agggactctggttcttggaatcaacgcgattctaggttcaattcaaacgatgttgcttca
caaatggtccagcaggggtccattcctccaattatgtatactggaagggggttgccaaat
gtttcaaatgcacaaagtgcctcctggaatggatttggaatattaccaggtataccaaat
ggtggtcttgacatgattcattccattggtttacaaggaacactcagaccacctatcaat
tcgtcattgaatatgggtattccacgccaaagatgtagagactttgaggagcgtggattt
tgccttagaggggacatttgcccaatggaacatggtgttaaccggattgttattgaagat
gttcagtctctttcacagttcaaccttcctgtttcacttccaagtgcacacttacttgga
acagctgctggatctggaccgctacagtcactgagtgcttcagctccttcaatgaatatc
aaaagtatacatggcaaagctaacaagcctagattgggtgatgaggttttgggcttgaat
ggtgcatatcctggttctagttgtgcgggtggagctgatttgtatgatcctgatcaacct
ctttggaataacagtggacctgaaacatcaaatgcgcttctaacagtacagtcacccaag
gctgatgaaactgagtcatttcccaatgatgcttcttctgataggcaacatgtgaggtta
tatgatagtgttgataatgattgcccagttggaacttctgcaactgcgataggtttgcat
agtgcctctttgtctgtctggggcagaattggtagttctaataacagatttgatgtgaaa
gagaaagttaattctaccccgattacctttccgtatcttgaaagtggcttggaggaagaa
aaggacgaattaactggtttccatggtgattcacgtccaagaaagcaaaccattgcggat
gatgctggccaaaaatctatggattcatcttccaggccacagggtgatagtatgcgtaac
agccgcaaaccatctcaaaaagcagtacgtactctatttgtcaatggcatacccctgaaa
agcaacaaaagggattctcttctttctcattttcaaaaatttggagaggttatggacatt
tatattccactgaatagtgagcgagcatttgtccagttttcgaagagggaagaggctgaa
gctgctttgaagtcacctgatgctgtgatgggtaatcgctttattaagctatggtgggct
aatcgtgataacattcctgatgatgcttttagcagtggaactggtgtatctgaaattttt
catggtgtagcacctgcttcagttccattccatccagctgtttctagtagaggaaaagat
actcttcatcagtctgctattctgaagattatttctgacgagttgccagcttccgatcac
cctaagcctgtcatcttaaatgggcctaaagttccacctccaatccaaaagaagcttgag
aacttggagcagctaaaggaggaaatccgtaagaagcaagaaatgctggagcaaaagcgt
accaacttcaggcgccagttggacaaacttgaaaaacaagcgacaggagtcaagggtgaa
atagttactgagcaagctgccaagagacctaaagtttgcacatcggcagatattgcaaaa
tcagcttctcccaggtcctctgattctgtttgtactgcagtatctccacatgctaaggca
atggttgacaagaaaaaatcagcagaaaccactgtcactcatagtcctaaaacaattaca
accatggttgtacaggaatctacaggcttgaagcagccgatccattcattaacgccagtg
gcatctccaattctaattaatagatacaaattggataaccgtcctactgtatttagaatc
atcccaccgttaccagcaggactagcaaatgttgctgttttgaaggaacacttccttttg
catggtgatctttctgatgttgagctagaaggtttgccagtccatgatggcagtagtgaa
tcagaggcatctccacattactcagctcgtatcacgttcactacacgtcatgctgcagag
agggcatttgctaatggaaaatgctggaaaggccacaatctgaaatttatgtggttgaca
tctagtacttctagcaatggtcatggtcatagagaaaaatctcaatctgctcccgaggag
actttagatactgatgtttctttggaagaaaaactagaatgtaatgttagccaagaagct
cctgcatcaggagatggggagcctattgcttcagcaacagcaagtggttttgtgcaggca
gaaccaagtgaagcttcccagtgtacaccatgcccagcatcatgtgagaaagagtcacct
gagggcaatctctgctga
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