Quillaja saponaria (soapbark tree): O6P43_009378
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Entry
O6P43_009378 CDS
T09778
Name
(GenBank) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_009378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_009378
03041 Spliceosome [BR:
qsa03041
]
O6P43_009378
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_009378
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
O6P43_009378
Spliceosome [BR:
qsa03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
O6P43_009378
Complex B
O6P43_009378
Complex C
U2 SnRNP specific factors
O6P43_009378
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
O6P43_009378
TFTC complex
O6P43_009378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-ProteinID:
KAJ7971328
UniProt:
A0AAD7PY38
LinkDB
All DBs
Position
4
Genome browser
AA seq
874 aa
AA seq
DB search
MIGAYEKQKLVYVLNRDTAARLTISSPLEANMSHTLVASEAQKHSAFYELDLGLNHVYRK
WSEQVDNSADLLVTVPGGGDGPSVLVCAENFVIYKNQGHPDVRAVIPRRADLTAERGVLI
VSAAMHKLKSMFFFLLQTEYGDIFKGSLFAASDFGNHALYQFKAIGDDADVETSSASLME
TEEGFQPVFFQPRRLKNLVRIDQVESVMPIMDMKVSHIFEEETPQIFPLCGRGPRSSLRI
LRTGLAISEMAVSKLPGDDSLMQVHPNGIQHIREDGRINEWRTPGKKTNVKVGFSRLQVV
IALNKGELIYFEVDMTGQLMEVEKHEMSGDVARLDIAPLPEGGQRSRFLAVGSYDNTIRV
LSLDPDDCMQILSVQSVSSAPESLLFLEVLASVGGEDCADHPASLFSMQGQACNALLVKS
SMTRYIHQGHFLLTPLTYETPEYAASFSSDQCVEGVVAVAGEALRVFTIERLGETFNETI
IPLRYTLRKFVLRPKKKLLVIIESDQGAFTAEEREAARKECFEAARTGGNGNLEQIENGV
DDEDNDDPLSAENYGYPKAESDKWVSCIRVLDPRTANTTCQLALQENEAAFSVCTVNFHD
KEHGTLLVLAVGVPVALCQFQGRLLAGIGRVLRLYDLGKRSLLKKCENKLFPNTICSIQT
YLDRIYVGDIQESFHYCKYRRDENQLDIFADDCVPRWLTASYHIDFDTMAGADKFGNIYF
MLLPQDVSDAIEEDPTGRRIKWEQGKLNGAPNKVEEIVQFHVDNVVTCLQKASLIPGGGE
CFIYGTVMGSVGALHAFTSRDDVDFFSHLEMHLRQEHTPLCGRDHMAFRSAYFPVKDVID
GDLCEHFPTLPMDLQRKIADELDRTPEEILKKLE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgattggggcatatgagaagcaaaaacttgtttatgtgttgaatagggatactgctgct
aggttgaccatatcctctcctttggaggcaaatatgtcacataccttagttgccagtgag
gcccagaagcattcggcattctatgagcttgatttggggctgaaccatgtgtatcgtaag
tggtcagaacaagtagataatagtgcagatttgcttgtcactgttcctggaggtggggac
gggcctagtgtgttagtatgcgcagaaaattttgtcatttataagaaccaaggacaccca
gatgttcgagctgtgattcctaggcgtgcagatttgactgctgagaggggtgttcttata
gtttcagctgctatgcataagctgaaatccatgttctttttccttttgcagacagagtat
ggggatatttttaagggttctttatttgctgcatcagattttggaaatcatgctctgtat
cagttcaaggcaataggggatgatgctgatgttgagacttcatcagcttcattaatggaa
acagaagaaggtttccagcctgtatttttccagcccaggagacttaaaaaccttgttagg
attgatcaagttgagagtgtgatgccaataatggatatgaaagtctctcatatctttgaa
gaagaaactcctcaaatatttcctctttgcgggcggggtcctcgttcttctctgaggata
ctgaggactggtttagcaattagtgagatggctgtgtcaaagcttcctggtgatgactct
ctaatgcaagttcaccctaatggaattcaacatatcagagaggatgggcgtatcaatgag
tggagaacgcctggaaagaagactaatgtaaaagttggcttcagtagacttcaagtggtt
attgcactcaataaaggcgaacttatatactttgaggtggatatgactggtcaattgatg
gaggtggagaagcatgaaatgtctggagatgttgctcgcctagatattgctcctttacct
gaaggcggacaaagatcacgatttcttgcagttggatcatatgacaacaccatccgtgtt
ctatcattggatcctgatgactgtatgcaaattctaagcgttcaaagtgtttcttcagct
ccagaatctctcctttttcttgaagttctggcatcagtgggtggagaagactgtgctgat
catcccgctagccttttctcaatgcaggggcaagcgtgcaatgctttgcttgtcaagtca
tccatgactcgttacatccatcaaggacattttcttttaacgccccttacctatgaaact
cctgaatatgctgcctcattttcatctgaccagtgtgtggaaggtgtagttgctgttgcc
ggtgaggcattgagagtttttactatagaaagattaggagaaacatttaatgaaacaata
attccattaagatacactctgagaaagtttgttcttcgacccaagaaaaaacttttggta
attatagagagtgatcaaggagcattcactgcagaagagcgagaagctgcaagaaaggag
tgctttgaggctgctcgaacagggggaaatggtaatttggagcaaatagagaatggggtt
gatgatgaggataatgatgatcctctatctgctgagaattatggttatcctaaagctgaa
tcagataagtgggtttcctgcatcagggttcttgatccaagaacagcaaatacaacttgt
cagctggcgcttcaggaaaatgaagctgcttttagcgtgtgcacggtgaatttccatgat
aaagagcatggaacacttttagttttggctgttggcgttcctgttgctttatgccaattc
caaggaagattactcgcgggaattggacgtgtgctcaggttatatgatttggggaaaagg
agtttgctcaaaaaatgtgagaataagctattccctaacacaatttgttctattcaaacc
tatctggatcggatttatgtgggtgacattcaagagtctttccattactgcaagtatagg
agggatgaaaatcaactggatatatttgccgatgattgtgttccaagatggctcactgca
tcataccacatagattttgacaccatggcaggtgcagacaagtttggaaatatctacttt
atgctgttaccacaggatgtctcagatgcgatagaagaagatccaactggcaggaggatc
aaatgggagcagggaaagcttaatggagctcccaataaggtggaggagatagtacagttt
catgtagacaatgtagtcacctgtttgcagaaggcatccctaataccgggtggtggggag
tgcttcatctatgggacagttatgggaagtgtgggggcattgcatgcttttacctcccga
gatgacgtggacttcttttctcatttggagatgcatttgagacaggagcatacaccacta
tgtggaagagaccacatggcttttagatctgcttactttcctgttaaggatgtaatcgat
ggggatctatgtgagcatttcccaacattgcctatggatttgcagaggaaaattgctgat
gaattggacagaacacctgaggagatactgaagaaacttgaataa
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