Quillaja saponaria (soapbark tree): O6P43_009718
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Entry
O6P43_009718 CDS
T09778
Name
(GenBank) GYF domain protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_009718
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
O6P43_009718
Surveillance factors
Other surveillance factors
O6P43_009718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-ProteinID:
KAJ7971731
UniProt:
A0AAD7PYZ7
LinkDB
All DBs
Position
4
Genome browser
AA seq
1569 aa
AA seq
DB search
MSDEKINLPDDLFSSKADDGQFPVKDECSGGHGEEKGTVGLFDDSKDQIASESIPLSPQW
LYSKPVDARTMTTGVAADTRVPGSFSQGNATDTILKDSWRLDGSQDKKDWRRTAPEVDIS
RRWREEERETNLLGRRDRRKDDRRAEGISTSETRALSSDRWHDSRGSGHETRRDNKWSSR
WGPEDKEKDSRTEKRNDVDKEDSHVDRQSSGGSNRASSERDPDSRDKWRPRHRMEGQAGV
VATYRTAPGFGLDRGRTEGANVRFSPGRGRANVSGNLQIGRPPLACTNGPVILNSNRSIL
GKSSLGLDFYCYPRGKLLDIYRKIKIDQILDTMPDGVDRASTITQLGSLEPLAVVAPAAE
EEDVLRDIWKGKITSSGVAGHSYRGRDGGANDTFKESGASKLHEEKMVQSIGVAVRDTGF
LCSSFDEPEAFDILQGTDSALQRHANLGVAESVATSEIGNQLPSNSGSLFEYSSLQQIPG
INQHQIKTNEKAHTSESVVSPEELSLCYLDPHGVIQGPFLGIDIILWFEQGFFGIDLPVR
LSDAPEGLPFQELGIVMPHLMIKSGSASSNNLIAKSEQSDATECNLEVGAPSVGYNGAAA
IDDHLWASSGFDATKSVIVQSQVPIQSYHSEIQLSDDEIKNFIAQNEVVLSGTSGIRNGN
PLKGKVDIRSSHSNSIGNPSVANDDSSIHNHEVDKLHPFGLLMSELRDSSHLRRAQSSNM
SSIMGDQRQFLDPFLERDTSIANRSSFGAIVDQPYRDTRADDYGTNGIFNHNVRVGSLDD
HHLSHMDKKINNFDMVENLMSQKLLNEQLQLQNNLSPDFPAHLTASGFEQFPGSLLQKMN
PNIQQFVQNSGSDFEHLLELQIQRQRHIELQQQHQHLQHQLKLQQQQHQQSQVQQVLLEQ
FLHHQMPDPNYGQSKLDPARDNLLDEVQLRKHLLHELQQNSYSLRNIDPSMEQILQANIG
SNTVQGQQTDFLNLLSRAKHGSMLPSEQQFRFQQEQLQAQHLMALRQQLGLEEERHSGRP
WPINDAGQLVRNSASHQLSQSAGFSASDIQRHQQMLSPHEEQLNYLGRNFAEWNQRGFYE
PSSLAFERPASGTPGMNYNSANASAHSLDLHDRRHYMHSADHMGLFSHHLQVPDEFYAGQ
TDANNSGLSGNNGHVGDNWADTRMQLLSLEAEQQRKEIGATLGSAELNMFAPGGTQEENS
KRALLDLLHHKLGLQPGQSSNSDNFHPVSSQSHEMSWRISEPSSLNHPFEPPPDQQVHLN
NSLLERPLGANSSALMQDHLGLLMNEHYKDSMDERMPLRSKSGALMEEQSLLSATKDTLH
TGYGNSRMTCKTALENDSIELEENKGERHEFKGTISTSKSASGISDLSEKAESTTNPMEL
PVIAHSRHSSLSSAGGDVGLYSCEMGLNNSLGEEVFSDRMPSTKGLNNAFHKRPPVSRVL
SSPDVQSDPTSLANQKSIFFRGPSDGENSATTKVIDVQSSGKKDVRFRRTSSCSDGAVSE
TSFMDMLKKPVLPEVDTASVAVTESSDSGAQGRSGKKKGKKGRQIDPSLLGFKVSSNRIM
MGEIQRLED
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaaaagatcaatctccccgacgatctcttctcctccaaggcggatgatgga
cagttcccggtaaaagatgaatgttcgggaggacatggcgaggagaaaggaactgtaggg
ttatttgatgattcaaaagatcaaatagcatctgagagcatacctttatctccacaatgg
ctttattctaagcctgttgatgccaggacaatgacaactggtgtagctgcggacacgcgt
gttcctggttctttttcccaaggaaatgccactgataccattctcaaagacagttggcgt
ttggatggttctcaggacaagaaagattggagaagaactgcacctgaagttgacataagt
cggcgctggcgggaagaggagagagaaacaaacttacttggtcgacgagaccgtagaaag
gatgatcgtcgtgcagagggcatctcaacttctgagactagagccttgtcatctgatcgt
tggcatgatagccgtggttctgggcatgaaacccgaagggacaacaagtggtcatcaaga
tggggacctgaagataaagagaaggattctcgaactgagaaaaggaatgatgttgacaaa
gaagacagtcatgttgaccgacaatcctctggtgggagtaaccgtgcatcttctgaacgt
gacccagattctcgtgataagtggaggccacgtcatcgtatggaaggtcaagcaggtgtg
gtggccacataccgcactgctcctggctttggactggataggggacgcacagagggagca
aatgtgcgattttctccaggacgaggaagggcaaatgttagtgggaacttacaaattgga
agacctcccttggcatgtactaatgggcctgttattttgaatagtaacagaagtatatta
ggaaagtctagcctaggtctggatttttactgctaccctaggggtaagcttcttgacatt
taccgtaagataaagattgatcagattcttgacactatgcctgatggcgtggaccgtgca
tcgacaataacacagctaggctctctagagccattggctgttgttgctcctgctgcagag
gaagaggatgtccttagagatatatggaagggaaaaataactagcagcggagtagctggc
cattcatatagaggcagggatggaggggcaaatgatacttttaaagaaagtggtgcttct
aagctacacgaggaaaaaatggtacaatcaattggcgtggctgtgagagatactggtttc
ctttgcagcagttttgatgagccagaagcttttgacatacttcagggaacagattctgct
ctgcagaggcatgctaatttgggtgttgctgaatcagttgctacttcagaaattggtaac
cagcttcctagcaattctggctctctgtttgaatattcatctttgcagcaaattccaggc
attaatcagcaccagataaagactaatgagaaggcacacacatctgaaagtgttgtctct
cctgaggagttgagtttgtgttatcttgatcctcatggtgtaatccaaggaccctttttg
gggattgatatcattttgtggtttgaacaaggcttttttggaattgacttaccagttcgc
ttgtctgatgctcctgagggattgccttttcaagaacttggcattgtcatgccacattta
atgattaaatcagggtctgcttccagcaataacctgattgctaaatcagaacaatccgat
gccaccgaatgcaacttagaagttggtgcaccctctgttggctacaatggagctgctgct
attgatgatcacctgtgggcgtcatcaggatttgatgctaccaaaagtgttattgtccag
tctcaagtaccgattcaaagttaccactctgagattcagttatctgatgatgaaatcaaa
aattttattgcacaaaatgaggttgttttatctggaactagtggaattcgcaatggtaac
cctctaaaagggaaggttgatatccgttcgtcccattccaattctatcggtaatccttct
gtcgcaaatgatgattccagcattcataatcacgaggttgataagttgcatccgtttggt
ctattaatgtctgaacttagagacagttcacatttaaggcgtgcccaatcctccaacatg
tcttcaataatgggcgatcagcgtcaatttctagatccatttcttgaaagagatacctct
attgccaatagaagctcctttggtgccattgttgatcaaccttacagggatacaagggct
gatgattatgggacaaatggcattttcaatcataatgtccgtgttggttcattagatgat
caccacttatctcacatggacaaaaaaatcaataattttgacatggtggagaatcttatg
tcacaaaagctgttgaatgaacaacttcagctgcagaataatttatctcctgatttcccc
gcacatcttactgcttctggttttgagcagtttccaggttctcttcttcagaaaatgaac
cccaacatccagcagtttgtccaaaactcggggtcagattttgaacatcttctggagctt
caaattcaacggcagcgtcacattgagcttcaacaacagcatcaacaccttcagcaccaa
ctaaaattgcaacaacagcaacaccaacaatctcaagttcagcaggtgcttctcgaacaa
tttctgcatcaccaaatgcctgatccaaattacgggcaatctaagctggatcctgccaga
gataatcttcttgatgaggttcaattgaggaaacacttgctgcatgaattgcagcagaac
tcttattctttaagaaacatcgatccatcaatggagcagatcctccaagcaaatattggg
tcgaatactgttcaaggacagcaaactgatttcttaaacctcttgtcacgagcaaagcat
gggagtatgcttccttcggaacaacagtttcgttttcagcaagagcagttgcaggcacaa
cacttaatggcattgaggcagcagctcggattagaggaggaaaggcattctggtagacct
tggccaattaatgatgctgggcagctagttaggaactctgcaagccatcaactgtcacaa
tcggcaggatttagtgcttcagatatccaacgacatcagcagatgctttctcctcatgaa
gagcaactaaactatcttggcaggaactttgctgaatggaatcagagagggttttatgag
cctagctccttggcatttgagagaccagcgtctggcacccctgggatgaattacaatagt
gcaaatgcttcagcgcacagtctagatttacatgatcggcgtcactacatgcactctgct
gatcatatgggtttgttctctcaccaccttcaagtgcctgacgaattttacgctggtcag
acagatgcaaacaatagtggcctctctgggaacaatgggcacgtgggagataattgggct
gacacaaggatgcagctactgagtcttgaagctgagcagcaaagaaaggagataggggcg
actttaggttctgcagaattaaatatgtttgcaccaggtggaactcaggaggaaaattca
aaacgagctttgctggacctacttcatcataaactgggtcttcaacctgggcaatcatcc
aatagtgacaatttccatcctgtatcatctcaaagtcatgaaatgtcttggaggatttct
gaacctagctccttaaatcatccttttgagccacccccagaccaacaagtccatctgaac
aattctcttcttgaaaggcctctaggtgccaattcaagtgccttgatgcaagatcatcta
ggtctgcttatgaatgaacattataaagattcaatggatgagagaatgcctcttaggtct
aaatctggagctttaatggaagagcaatcactcttatcagctactaaagatactttacat
actggttatggaaattctcgcatgacttgtaaaacggcgttagagaatgactcaattgag
ttggaggaaaataagggggagagacatgagttcaaaggcacaatttcaaccagcaagtcg
gcttcagggatctcagacttgtcagagaaagcagaaagcaccacgaatccaatggaacta
ccagttattgcccatagcagacatagttcattaagcagtgcaggtggtgatgtaggctta
tactcctgtgagatgggattaaataactcactaggtgaagaggttttcagtgacaggatg
ccttcaacaaaagggctcaacaatgctttccataaacgccctcctgtgtcccgagtttta
tcttcccctgatgttcaatcagacccaacatcccttgccaaccagaaaagtatttttttc
cggggaccatccgatggagagaattccgcaaccaccaaggtcattgatgttcagtcttct
gggaagaaagatgtgcggtttaggaggacctcttcttgcagtgatggtgctgtgtcagag
acctcatttatggatatgcttaagaaaccggtcctccctgaggttgatacagccagtgtt
gctgtgacagagtcatctgacagtggagcacaagggcggagtggcaaaaagaaggggaag
aaaggaaggcaaatagatccttctctacttggtttcaaggtctctagtaacaggatcatg
atgggggagatccaacgccttgaggattga
DBGET
integrated database retrieval system