Quillaja saponaria (soapbark tree): O6P43_009835
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Entry
O6P43_009835 CDS
T09778
Name
(GenBank) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P43_009835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_009835
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
O6P43_009835
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
O6P43_009835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-ProteinID:
KAJ7971867
UniProt:
A0AAD7PZ63
LinkDB
All DBs
Position
4
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AA seq
896 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDLFDNIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQVDTFEAELEGLSVKKGKTRPPRLIHLETSITRHKS
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYISLPLDKVES
LEDLVIIAPPGLVKGAPALSLKNSLAASTTQTPAIVISTHQQGASVHEQVENAASQDSNS
DIVVRTPPSKNSVISSAASTPTGSHATPLTVNVAVHNLSGAPTAAAVLPSSDSVRSALES
TIAANSSSGNQTATVKEEEINTFPGQKLSPSLTDAGVRGRGGLSSQAASALPLSSSNVVP
SNSALGTFPSASDITKRNLLGADDRLGSSAVVQPLVSPVSNRIMLPQTAKANDGSGSVES
SNINEAAAVSGRVFSPPVVPGMQWRPGSSFQNQNEAGQFRGRTEIAPDQREKFLQRLQQV
QQQGHSTLLGMTSLTGGNHKQFSAQQQNPLLHMQQFNSQGSSVSSQSALGLGVQAPGLNS
ISSTSLQQHTSSIHPQSSQQAIISAVQKDVDISNSLAEEQQRLQNLPDDSAIESTASTGL
GNNLMNEDDLKATDASVGQSGSLSEPSQITRDTDLSPGQPLQPNQPSGSLGVIGRRSVSD
HGAIGDSVSGSSLNSGGMHDQLYNLQMLEAAYHKLPLPKDSERARTYTPRHPTKTPPSYP
QVQAPIVNNPAFWERVGLEQYSTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTW
FQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaagtcgaaagcttcagggagaaattgatcgtgttctgaagaaggtacaagaa
ggtgtagatttattcgacaatatctggaacaaggtttatgatacggaaaatgcaaatcag
aaggagaagtttgaagcggacttgaagaaggagattaagaaactacagaggtacagggac
cagattaagacatggattcagtctagcgagataaaagataagaaggttagtgcctcttat
gagcaggcgctggtggatgcccgcaagctcattgaacgtgaaatggaacgattcaagatc
tgcgagaaagaaactaagactaaagcattctctaaagaaggtttgggccaacaacctaaa
actgatccaaaagagaaggctaaatcagagacaagggattggttgaacaacgtggttggg
gagttagaatctcaagttgatacttttgaagccgagcttgaagggctatctgttaagaaa
gggaagacaaggccacccagactgatacatttagagacatctatcactcgacacaagtct
catataatgaaattggagcttatcttgaggttgctggataatgatgaattgagtcctgag
caggtcaacgatgtcaaggatttcttggatgattatgtggagcgtaatcaggaggacttt
gatgaattcagtgacgttgatgagctttacatttcgctacctttagataaggtggaatct
cttgaagatcttgttataattgctcctcctggtcttgttaagggtgcacctgctcttagc
ttgaagaattctttggcagcatccacaactcaaacacctgccattgttatttctactcat
cagcagggtgcttctgttcacgagcaggttgagaatgctgcttcccaggatagtaattct
gatattgttgtgagaactccaccttccaaaaatagtgtaattagttctgctgcatcaaca
ccaacagggagtcatgcgacacctcttactgtgaatgttgcggttcataatttgtctggt
gcaccaactgctgctgcagtccttcctagttcagattctgttcggagtgccttggagagc
accattgctgccaattcctcctctggtaatcagactgctacagtaaaggaagaagagatt
aataccttccctggacagaaattgtctccatcgcttactgatgctggagttaggggtaga
ggtggtctctctagtcaagctgcatctgccttgcctctaagttctagcaatgtagttcca
agcaatagtgctcttggtacattcccttcagcctcagacataactaagagaaacttatta
ggagctgatgatagacttggaagtagtgcggtggtgcagcctcttgtatctcctgtaagt
aatagaataatgttgcctcagactgccaaggctaatgatggatctggctcagttgaatct
agtaatataaacgaggctgcagctgtatctggaagagttttctcccctcctgtggttcct
ggaatgcaatggaggcctggaagctctttccaaaaccagaacgaagctgggcaatttcgt
ggaagaactgaaatagctcctgaccagagagaaaaatttttgcaacgtcttcagcaagta
cagcaacaagggcacagcacgctccttggcatgacatcacttactggtggaaatcataag
cagttttctgcccagcagcaaaaccctcttttgcacatgcaacagtttaactctcaaggt
tcatctgtctcttcacaatctgcactgggactaggagtacaggcaccaggtctcaatagt
atttcatctacttcattgcagcaacatacaagttctatccatccccagtctagtcaacag
gcaattatctcagctgttcaaaaagatgttgatattagcaattccctggctgaagagcag
cagcggctgcagaatttacctgatgattcagctatagaatctactgccagtactgggctt
ggcaataatctcatgaatgaggatgacttgaaagccacagatgcttctgtaggacaatct
ggttctttgtcagaaccttctcaaattaccagagatactgatctatctcctggacaacct
ttacaacccaatcaaccttctggtagccttggtgttattggcaggagaagtgtttctgac
catggtgcaattggtgatagtgtcagtggatctagtttaaactctggaggaatgcatgat
cagttatataatttgcagatgcttgaggctgcatatcacaaacttcctttacccaaagac
tctgaacgtgcaagaacttatactcctagacacccaacaaaaacacctcctagctatcct
caagtacaagcacctattgttaataaccctgccttttgggaacgagtaggtcttgaacaa
tatagcaccgataccctgttcttcgcattttattatcaacagaacacttaccaacaatat
ctggctgcaaaagagctaaagaagcagtcttggagataccacagaaagtataatacgtgg
tttcaacggcatgaagagccaaaagtggccactgatgaatatgagcagggaacatatgta
tactttgattttcatattgccaacgatgatctacaacatgggtggtgtcaaaggatcaag
actgagttcacttttgagtataattatcttgaggacgagctcattgtatag
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