Quillaja saponaria (soapbark tree): O6P43_009955
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Entry
O6P43_009955 CDS
T09778
Name
(GenBank) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_009955
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
O6P43_009955
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
ALIX_LYPXL_bnd
TEX13
POL2_thumb
Pol_alpha_B_N
Motif
Other DBs
NCBI-ProteinID:
KAJ7972003
UniProt:
A0AAD7PZE8
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All DBs
Position
4
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AA seq
562 aa
AA seq
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MSDDVFDGQILSEKLSKLNNSQQSIESLSRWCISYRKKAKQIVETWDKLFNSSQKEQCVS
FLYLANDILQNSRRKGSEFVNEFWKVLPADLKLVYQNGDENGKKAVTRLVDIWEERKVFG
SRGQGLKDELMGKSSIPVSAGNAKSSNPIKIVKRDAHSVRIKLAVGGQPEKILTAFQSVL
DEHLTEEAALNKCNGAVSHVGKIMEDVESALAQGDHLGSTFVTDIQEQEKELHQCIAQLE
NAKATRAALLSQLKEALQDQEARHQLIHAHLQAARGQIEQAGNMRKRLISVPLPGLPTSI
TTHITEARLSEQNLPSVPPNGTLSQPPLNQPVISFAPLKTTDEDHKRAAAAAVAAKLAAS
TSSAQMLTSILSSLAAEEASSMNGSLKSTGFSSGLPMFTTEKRQKLDKPMPVPDVSSSDT
GSASYFSPLQQPPVTNMPPAPSTGLQSASQANQAAFAPPPPPLPPPPHSPATQPANQYVY
SSGLMVGSVPYAYGANNLPPPPLHPHVAMGLSRPSPQPPQQPQAQQQTQQQQQPATGGYY
RPPGIGFYGQNHPPTPPPVPRQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacgtgtttgatggacagatattatctgaaaagttgtcaaaactcaacaac
tcacaacaaagcattgagtcattgtctcgctggtgtatctcttaccggaagaaagcaaaa
cagattgttgaaacatgggacaaattgttcaactcttcccagaaagagcaatgtgtttct
tttctgtacttggctaatgacattttgcaaaatagtaggcgaaaaggcagcgagtttgtg
aatgaattttggaaagttcttcctgcagaccttaaacttgtttatcaaaatggtgatgaa
aatggaaagaaagcagtgactagactggttgacatatgggaggaaaggaaggtttttgga
tccagagggcagggtctcaaagatgagttgatgggtaagagttctattccagtgtctgcc
ggaaatgcaaagagttcaaatcctatcaagatagtgaagagggatgcacattcagtgaga
attaaactagctgtcggggggcagcctgagaaaatactaacggcatttcaatctgtactt
gatgagcatcttactgaggaagccgccttaaacaaatgtaatggagctgtatctcatgtg
ggtaaaattatggaagatgttgagagtgccttagctcaaggagatcatctgggatctact
tttgtgactgacatacaagagcaggaaaaggaacttcaccaatgcattgcacaacttgaa
aatgccaaggcaactagggctgctttgctttcccagcttaaagaagcacttcaggaccaa
gaagcaaggcatcaacttattcacgctcatttacaagctgcgcgaggtcagattgagcaa
gcaggcaatatgaggaagagacttatatcagtccctcttcccgggctcccaacaagtatc
actacccatataactgaagcaaggctgtcagaacagaatcttccttcagttccaccaaac
ggcaccctgtctcagcctcctcttaaccaacctgttatttcatttgcacctctgaaaact
actgacgaagaccacaaaagagcggcggctgctgctgttgctgctaagcttgctgcctct
acatcctctgcacagatgcttacttctatcctttcctctcttgctgctgaagaagcttcc
tccatgaatggcagcttgaaatccacaggattttcttctggactacctatgtttaccact
gagaaaaggcaaaaacttgataaaccaatgcctgttcctgatgttagcagttctgacaca
gggagtgcatcctatttttctcctctacaacagcctcctgtaaccaatatgccccctgca
ccatcaaccggcttgcagtccgcatcccaagccaaccaagctgcatttgctccgccgccg
ccgccactcccaccaccacctcattctcctgcaactcaaccagcaaatcagtatgtttat
tcttctggtttgatggtggggtcagtcccatatgcttatggagcaaataacttaccgcca
cctccactgcatccacatgttgcaatgggcttatcaaggcccagccctcagccgccacag
cagcctcaggctcagcagcagacacagcagcaacagcagccagcaactggtggatattat
aggccaccaggtattggattctacgggcaaaaccatccgccaacaccacctccagttcct
cgtcaatga
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