Quillaja saponaria (soapbark tree): O6P43_009999
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Entry
O6P43_009999 CDS
T09778
Name
(GenBank) Transcription elongation factor SPT6-like protein
KO
K11292
transcription elongation factor SPT6
Organism
qsa
Quillaja saponaria (soapbark tree)
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_009999
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_009999
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
O6P43_009999
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
O6P43_009999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
Spt6_S1
Tex_central_region
HHH_9
HTH_44
HHH_3
SAS4
MRP-S34
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-ProteinID:
KAJ7972054
UniProt:
A0AAD7VDW5
LinkDB
All DBs
Position
4
Genome browser
AA seq
1046 aa
AA seq
DB search
MTEKDNQIREIDIPERMQIFEESTGSPIDESSIEEESHWIRNQLVNGMVPWIWKRNTEAM
GTPEAMQTPESTRNPQERDGGSLPIDRVDILRFLELHHVQKLDIPFIAMYRKEECPSLLK
DLELLEANDDNWEKNEKKPTLKWHKVLWEIQDLDRKWLLLQKRKSALNSYYSKRFEEESH
RIYDETRLALNQQLFESVMRSLKAAESEREVDDVDSKFNLHFPPGETGVDEGQYKRPKRK
SLYSDYSKAGLWEVANKFGYSSEQFGLQLSIVPMDELEDPKETPEEMASNFTCKLFETPQ
TVLKGARHMAAVEISCEPSVRKHVRCNFMEHAVISTCPTAEGNVAIDSFHQFAGVKWLRE
KPLSKFEDAQWLLIQKAEEEKLLQVTIKMPEKDLDRLLNDFNSYYLSYGVSRSAQLWNEQ
RKLILQDALFGFLIPSMEKAARSLLTSRANNWLRMEYGKVLWNKASVGPYHLKDNDLSSD
DEAAPRVMACCCSPGKPTTFVMLDSSGEVIDVLHSGSLTLRSQNVNDQQRKKNDEERVLK
FMTDHQPHVVILGAANLSRTRLKEDIYEIIYKMVEENPRDVGHEMDGLSIVYGDESLPCL
YEASRISSDQLPGQSGIVKRAVALGRHLQNPLAMIATLCGPVRDILSWKISPLESFLTPD
EKYWMVEQVMVDATNQVGLDINLAVSHEWLFAPLQFISGLGPRKAASLQRSLVRDGAIYT
RKDFVTTHGLGKIFFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYGLAQELAKVV
YDADGPGDALEMAIEHARDRPTYLKHFDIDDYAKSKKFENKRETFHDIRRELIQGFQDWR
KQYEEPSQDEEFYLISGETEETLAEGRIVQATVRRVQPQKAICVLESGLTGMLMKEDYTD
DWRDISELSDRLHEGDILSCKIKSIQKNRCQVFLVCRESEMRSHRLQNICNLDTFYHEDQ
SSLQSKQDKACKEKELAKRHFKPRMIVHPRFQNITADEAMEFLSDKDPGESIIRSSSRGP
SYLTLTLKVYHGVYAHKEIVEGGKDH
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaggataaccagattagggagattgatattccagagagaatgcagatattt
gaggaaagcactggttctccaatagatgaaagtagtatagaagaagagagccactggata
cgtaatcaacttgtaaatgggatggtaccctggatttggaagaggaatacagaagccatg
gggactccggaagccatgcagactccggaatccactaggaatccacaagagagggatggg
ggaagtttaccaattgacagggttgatattctaagatttttggagttacaccatgtgcag
aaattagatattccatttattgctatgtatcggaaggaggagtgcccaagcctattgaaa
gatctggagctacttgaagccaatgacgataactgggagaagaatgagaaaaaacctact
ctaaagtggcacaaggttctttgggaaattcaggatttggacagaaagtggttgctcctt
cagaagcgaaagagtgctctaaactcatattacagtaagcggtttgaagaagaatctcac
cgcatttatgatgaaacaagacttgctttaaatcaacaattgtttgagtcagttatgagg
tcgctcaaggctgcagaatccgagagagaggtcgatgatgttgactccaagttcaacttg
catttccccccaggtgaaactggtgttgatgagggtcaatacaagaggcctaaaaggaaa
tcactatatagtgattacagtaaggctggtctgtgggaggttgcaaataagtttgggtac
agctctgagcaatttggtttgcagctgtcaatagttccgatggatgagttggaggatcct
aaggaaacaccagaggagatggcttcaaacttcacgtgtaaactgtttgagacacctcaa
actgtactcaaaggggctaggcacatggctgctgtggagataagttgtgagccttctgtc
aggaaacatgtacgttgcaacttcatggagcatgctgtgatatccacttgtccaactgct
gagggaaatgtggcaatagattctttccatcagtttgctggggtgaagtggttacgtgag
aagcccttgagtaaatttgaggatgcacagtggcttctaatacagaaagccgaagaggag
aaacttcttcaagttaccattaagatgccggaaaaggatttagatcgtttgttaaatgat
tttaattcctattatcttagttatggtgttagtagatctgcccaactatggaatgagcag
agaaaattgatactgcaagatgcactgtttggtttccttataccttcaatggaaaaagca
gcaagatccttgttaacgagtagggcaaataactggttacgtatggaatacgggaaggta
ctgtggaacaaagcttctgttggaccatatcatctgaaggataatgatcttagttctgat
gatgaagctgcacccagggtgatggcttgctgttgcagccctggcaagccgacaactttt
gtgatgttagattcatcaggagaggtgatagatgtccttcactctggatcccttacttta
cggtctcagaatgttaacgaccagcaacgtaagaaaaatgacgaggaacgagtattgaag
ttcatgacagaccaccaacctcatgttgttattttaggagcagcaaatttgtctcgtacc
cgtttgaaggaagatatatatgagatcatttacaagatggttgaggaaaatcctagagat
gttgggcatgaaatggatgggctaagcattgtatatggggatgaatctctcccttgtctt
tatgaagcatctcgaatttcgtctgaccagcttcccgggcagtctggtattgtaaagcgg
gctgttgctcttggccgccatctgcagaatccgttggcaatgattgcaactttgtgtgga
cctgtaagggacatcttgtcatggaaaataagccctttggagagctttctcacccctgat
gagaagtattggatggttgaacaggttatggtggatgccaccaatcaggtgggtttggac
atcaatttggccgtaagtcatgaatggttatttgctccactacagtttatttctgggctt
ggacccagaaaggcagcatctttgcagaggtccctagtgagagatggagctatttatacc
cggaaagattttgtgactacacatggactgggtaaaattttttttgtcaatgccgttggt
ttcttgcgagttcggaggagtgggttggctgctagcagcagccaatttattgatttgttg
gatgatacaagaattcatcctgaatcttatggtcttgctcaagagttggccaaagttgtg
tatgatgcggatggcccaggtgatgcacttgagatggcgatagagcacgcgagagatcga
ccaacttatttgaaacactttgatattgatgattatgctaaatccaagaaatttgagaac
aaaagggaaacttttcatgacattagaagggagttaattcagggctttcaggattggcgt
aaacaatatgaagaaccaagtcaagatgaggaattctatttgatttcgggtgaaactgaa
gagacccttgctgaaggaagaatagtgcaagcaactgtacgcagggtgcaacctcaaaaa
gcaatttgtgtgcttgaatctggactgactgggatgcttatgaaggaggattacacagat
gattggagggacataagtgaattatctgacaggctacatgaaggtgacattctcagctgc
aaaatcaaatcaattcaaaagaataggtgtcaagtcttccttgtttgtagggagagtgaa
atgagaagtcataggttacagaatatctgtaatcttgataccttttaccatgaagatcag
agcagcctacaaagtaaacaagacaaggcttgcaaagaaaaggagcttgcaaaaaggcac
ttcaagccaaggatgatagttcatcctcgcttccaaaacataactgcagatgaagcgatg
gagttcttgtctgacaaagatcctggagaaagtattatccgttctagctcacgcggtcct
tcataccttactctgactttgaaagtctaccatggtgtttatgcccacaaagaaatagtt
gaaggtggaaaggaccattag
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