Quillaja saponaria (soapbark tree): O6P43_010120
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Entry
O6P43_010120 CDS
T09778
Name
(GenBank) Nuclear pore protein
KO
K14309
nuclear pore complex protein Nup93
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
O6P43_010120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_010120
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
O6P43_010120
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
Motif
Other DBs
NCBI-ProteinID:
KAJ7972191
UniProt:
A0AAD7PZT1
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Position
4
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AA seq
863 aa
AA seq
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MANEHDLSSWSDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEQLSKKLKSKTLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEDYLQQVHEMAMVSAVQEA
QKDKLRSFSDYMMKVLEEDWQKEKRDFIQSLNRISTLPRTNMTEAITGGALSGQIVSMVS
TPLVSSGLSSMDIVRLAKKPIIEKKASIYAEVVKNLNKARERGLPFKPATAFRSAYQSLG
LDVTGGKSVTIQKIWHLVQMLMDEDSAVQRNVSKKMSLVIGARCHLEWGHQKYIMDTIQS
HPAQASLGGVVGNLQRVRAFLRIRLRDYGVLDFDAGDERRQPPVDTTWQQIYFCLRTGYH
AEARNVALSSRASQQFATLLTEWINTGGMVPADIAAAASEECEKMLRMGDRVGRAAYDKK
KLLLYAIISGSGRQIDRLLRDVPTLFNTIEDFLWFKLSAVRDCPDGASSLVLTDGLVPYS
LDDLQVYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAVSYMSKESGDEGYDIDAAHIS
IVLADHGVLSEDAGAGKNLGVMDSYAEASSITRQYGSRYLHHGDLQMALEYYAQAAAAVG
GGRLAWTGRGNVDQQRQRSLMLKQLLTELLLREGGIYLLLGARGSGEEGELGRFLTDPRA
RQQYLNDAAFQCQAAGLYDQSIDIQKRVGAFSMALDTINKCLSEAICALFCGKLDGESWT
AGLIHSGNEILETYRYHPDVSLQEGENVYEQQNVLRQLEAILSIHKLARAGLHVDALREV
AKLPFLPLDPRASDVTADVFRNLSPHVQACIPDLLKVALTCLDNVTDSDGSLRALRAKIA
SFIANNLKRNWPCDLYERVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgagcacgaccttagcagctggtctgatctgctccattcgtcaacgaagctt
cttgaacaagctgctccttcagctcagtttcctcctctccagagaaacttagatcagttg
gaacaattgtccaagaaacttaaatctaagaccctaagaactgaggctccttctcagtct
attgctgctacaaggcttcttgctcgagagggaataaatgcagagcagcttgcacgtgat
ctgaagtcttttgagttgaagacaacatttgaggatgttttccctgctgaggcaacaagt
gttgaagattatttgcagcaggtccatgaaatggcgatggtctcagcagtccaggaggct
cagaaggataaactcaggagttttagtgattacatgatgaaagttttggaggaggactgg
caaaaagaaaaacgtgatttcattcagagtctaaaccggatttcaacattacctaggacc
aatatgactgaagccatcactgggggtgctctttcgggtcaaattgtgtccatggtttca
acccccctagtttcatctggtttatctagcatggatattgtacgtttggctaagaagccc
atcattgaaaaaaaggcatcaatctatgctgaagttgtgaagaatctaaataaggctagg
gaacgtggcttaccatttaaacctgctacagctttcaggagcgcttatcaaagtctgggt
cttgatgtaaccggtggaaaatcagttaccattcagaagatttggcaccttgttcagatg
ctgatggatgaagattcagctgtgcaacggaatgtttcaaaaaagatgtcactagttatt
ggtgcaagatgccacctagaatgggggcatcagaaatacatcatggatacgatacaaagc
catcctgcacaggcttctcttggtggggttgttggaaatttgcaaagagttcgcgccttc
cttcggatacgtttaagggattatggagttctagattttgatgctggtgatgaacgaagg
cagcctcctgttgataccacttggcaacagatctatttttgcttgcgaaccggatatcat
gccgaggcaagaaatgttgctctgtcatcccgggcttcccaacaatttgcaaccttgctt
acagagtggattaatactggaggtatggtgccagcggatattgcagctgctgcatcagaa
gaatgtgaaaaaatgttgagaatgggtgatcgcgtgggaagagctgcatatgacaagaaa
aagttactgctttatgctatcatatcaggttctggcaggcaaattgatcgcctgcttaga
gatgtaccaacacttttcaataccattgaggacttcttgtggttcaaattgtcagctgtg
agggactgccctgatggggcttcatccctggttttgactgatggtttggtaccatacagc
ctggatgatttgcaggtttacctgaataaatttgaaccatcatactatacaaaaaatgga
aaagatcctctggtatatccttatgtcttacttttgagcatccaattgttacctgctgtg
tcatatatgtctaaggaatcaggagatgaaggatatgacattgatgctgcccatatttcg
atcgtgctagcagaccatggggtcctttctgaagatgctggtgctggaaaaaacttgggg
gtcatggattcttatgcagaagcgtctagcataaccaggcagtatggatctaggtatttg
catcatggtgatctacaaatggcattagaatattatgcgcaagctgctgctgcagtgggt
ggtgggcggttggcatggactggtagggggaatgtggatcagcaaaggcagagaagcttg
atgctgaagcaactcctaactgagctgttgctaagggaaggggggatatatcttttactt
ggtgcaagaggttctggtgaagaaggtgaattggggcgttttctgactgatcccagggca
agacaacaatatctaaatgatgcagctttccagtgtcaggcggctggcctatatgaccaa
tctatagatatccagaagagagttggggccttttcgatggctctggatacaataaataag
tgtctttctgaagcaatttgtgccctcttttgcggtaaattagatggcgagagctggact
gcaggcctcattcattctggcaacgagatcttggagacatacagatatcatccagatgtc
agtcttcaagagggagagaatgtgtatgagcagcaaaatgtgttaagacaacttgaggca
atattgtcaatccacaagttggcaagagcaggccttcatgttgatgcactaagggaggtt
gccaagcttccatttcttccgttagatcctcgagcctctgatgttactgctgatgtattc
cgtaatttatctcctcatgtccaagcttgcattccagaccttttgaaggttgctctcacc
tgtcttgacaatgtgactgactctgatggatcacttcgagccttaagggccaagattgct
agtttcatcgcaaataatttaaaaaggaactggccgtgtgatttgtatgaaagggttgcc
cggagcttgtga
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