Quillaja saponaria (soapbark tree): O6P43_010126
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Entry
O6P43_010126 CDS
T09778
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O6P43_010126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_010126
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
O6P43_010126
Prokaryotic type
Archaeal type
TFB
O6P43_010126
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_8
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
KAJ7972199
UniProt:
A0AAD7PZQ1
LinkDB
All DBs
Position
4
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AA seq
312 aa
AA seq
DB search
MSDAYCSDCKRQTEVVSDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG
GPSNPLLADGGLSTVIAKPNGGTGEFMSSSLGRWQNRGSNPDRGLIMAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDRKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
AKEEDIKTLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcgtactgctccgactgtaagcgccagactgaggtggtttccgatcactcg
gctggtgacactgtatgttccgagtgtggacttgtgcttgagtcccattccatcgatgag
acctctgagtggcgtacgtttgcgaacgagtcgggggataatgacccgaatcgtgttggt
ggacccagtaaccctctcctggccgatggtgggttatcaacggttatagcaaagcccaac
ggaggtacgggagagtttatgtcttcgtcgctgggtcggtggcagaatcgcgggtcgaat
ccggatcgggggttgattatggcatttaagaccatcgctactatgtctgataggttgggt
ctcgttgcaaccatcaaggatcgggcaaatgagatatataagagggttgaagatcaaaag
tctagtagaggaagaaatcaggatgctttgttggctgcgtgcctgtatattgcttgtcga
caagaagacaagcctcgcactgtaaaggaaatttgctctgttgccaatggagccacaaaa
aaggaaattggccgagcaaaagaatacatagtgaaacagcttgggctagagaagggtcag
tcagtggagatgggaacaattcatgctggggacttcatgaggcgattttgttccaatctt
ggtatgaataatcaagctgttaaagctgctcaagaagccgtgcagaagtcggaagagttt
gatatcaggaggagccctatatcaatcgcagcagcagttatttatataattacccagctt
tctgatgatagaaagcctctcaaagatatatcagttgctacaggagttgcagaggggact
attaggaattcctacaaggatctttatccccatgtatcaaaaatcataccaggctggtat
gccaaggaggaggatataaagactctttgcagcccttga
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