Quillaja saponaria (soapbark tree): O6P43_010474
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Entry
O6P43_010474 CDS
T09778
Name
(GenBank) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O6P43_010474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_010474
04121 Ubiquitin system [BR:
qsa04121
]
O6P43_010474
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_010474
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_010474
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
O6P43_010474
Ubiquitin system [BR:
qsa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
O6P43_010474
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
O6P43_010474
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
O6P43_010474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT
BRCT_2
zf-RING_UBOX
RTT107_BRCT_5
zf-HC5HC2H_2
zf-C3HC4_4
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
PHD_NSD
zf-RING_6
zf-RING_2
Prok-RING_4
Motif
Other DBs
NCBI-ProteinID:
KAJ7972612
UniProt:
A0AAD7Q0K3
LinkDB
All DBs
Position
4
Genome browser
AA seq
723 aa
AA seq
DB search
MGFSLKCCNSKLLNPWFLQFQKMGLELKCPLCLNLYQKPVLLPCDHIFCNSCICIPNLTI
SGAECAICKSQFANQDLRAAAFMENIITIYRSLDATFSDSLFLQTSSDAARVSEPHQASL
DSNFNAKVSKDPFQITKGDNLSCSDKEQVRVPLTLHHPVQDGKSRNQKNEKCNTPMDGKA
GNFEMSSEREFDFRGSSNPNSEMLSSKLEVGQYDKSGIMEIDMNQVTQLSPEIPPFRDSK
GSESECSNQDSQHKLESSSVKGGIKETGNSERRMIHLRPESYAPEWDDRMRTVKRQKKMS
CRPLDQGLKSDDHIQPDDSYANKSICSFCQSSKASEDTGPMLHYANGTSVVGDAAVQPNV
IHVHKVCIDWAPQVYFVPDVVKNLKAEVARGAKLKCSRCGLKGAALGCYVNSCRRTYHVP
CAMKISDCRWDCDNFRMLCPAHSSVEFPNEKSKRGDHNSKNHSMSTPLIPMLSNFWVAPA
DGVKKLVFCGSALSTEEKIHLVKFGVTVTKFWTPNVTHVIAATDANGVCSRTLKVLMAIL
HGRWVLKIDWINACMEAKHLVEEEPYEVSLDNYGCRGGPKAGRLKALANEPKLFCGLSFY
FSGDFVPAYKEDLLDLVLAGEGIVLESKEELVSKSHDCRLTPSKLLVVYSLDPPEGCKLG
DEVSILWERLKEAEDVADKTGSQVSGHSWILESIASCKLQPFSTDEGISAAIPRQNRSRI
IIS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggggttttctctgaagtgctgtaacagcaaacttcttaatccatggtttcttcaattt
cagaaaatgggtctcgagctcaaatgccctctctgcctaaacttgtaccaaaaaccggtg
ttacttccgtgcgatcatatattctgcaattcctgcatctgcatacccaatttgacaatt
tctggagcagaatgtgctatttgtaaatctcagtttgcgaatcaagatctaagggcagca
gctttcatggaaaatataataaccatctatagaagcttggatgccacattttctgacagt
ctgtttctgcaaacttcttctgatgctgcgagggtttcagagccacatcaagcatcactt
gattcaaactttaatgctaaggttagcaaggatccatttcaaattaccaaaggggataat
ctatcatgttcggataaagaacaagttcgggttccattgactctacatcatcctgttcaa
gatgggaaaagtaggaaccagaaaaatgagaaatgcaacacacccatggatgggaaagct
gggaattttgagatgtctagtgagagagaatttgattttagaggttccagtaaccctaat
tcagaaatgctaagttcaaaactggaagtggggcagtatgacaagagtgggattatggaa
atagacatgaatcaagtgacacaattatcacccgaaattcctccatttcgtgatagcaaa
ggttcagaaagtgagtgcagcaatcaagacagccagcataaactggaaagttcttcagtg
aagggagggattaaagagacggggaattcagaaagaagaatgatacatttgagacctgaa
agttatgcccctgaatgggatgatcgtatgaggactgtgaaaagacaaaagaagatgagc
tgcaggccattagaccaggggttaaaaagtgacgatcacattcaaccagatgattcatat
gcaaacaaaagcatttgttcattttgccaatcttctaaagcctccgaggatactgggcca
atgttgcattatgccaatgggacttcggtagtgggagatgcagccgtccagccaaatgtt
atacatgttcataaagtttgcattgattgggcgccacaagtgtattttgttccagatgtt
gttaagaatttgaaggcagaagtggcaaggggtgcaaagcttaaatgtagcagatgtgga
ttaaaaggagcagctctgggctgctatgtaaattcctgtagaaggacttaccatgttcct
tgtgcaatgaaaatctcagattgtcgttgggactgtgacaactttcgtatgctctgtcca
gctcattcttctgttgagtttccaaatgagaaatccaagcggggagaccataattccaag
aatcattccatgtccactccactgattcctatgctgtcaaacttttgggtagctccagct
gatggagtcaaaaaattggttttctgtggatctgccctgtccactgaagaaaagatacat
ctagtcaagtttggtgtaactgtgactaagttctggactcccaatgtcacacatgtcatt
gcagcaactgatgcaaatggagtgtgctccaggacgctgaaagttctcatggccatttta
cacgggagatgggttcttaaaattgactggataaatgcatgcatggaagcaaagcatctt
gtggaagaagagccatatgaagttagtcttgacaactatggctgccgtggtggccctaaa
gctggcagactcaaggcattggccaatgagccaaaactcttttgcggcttaagtttttat
ttctcgggtgattttgtcccagcttacaaggaagatctcctagatttggttctagctgga
gaaggtatcgttttggaaagcaaggaagaactggtgtcaaaaagtcacgactgtcggttg
actccttcaaagttgctggttgtctacagtcttgatcccccagaaggatgcaaattggga
gatgaagtttcaattctttgggagagattaaaagaggcagaggatgttgctgataaaacc
ggttctcaagtaagtggtcactcatggattctcgaatcaattgcttcatgtaagttgcag
cctttctcaactgatgaaggcattagcgctgcaatacctcgtcagaacaggtcaagaata
ataatcagttaa
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