Quillaja saponaria (soapbark tree): O6P43_010623
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Entry
O6P43_010623 CDS
T09778
Name
(GenBank) Pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
O6P43_010623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsa03041
]
O6P43_010623
Spliceosome [BR:
qsa03041
]
Complex C
Other components
Step II factors
O6P43_010623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
New_glue
HCP
MUCL1
LAGLIDADG_2
Motif
Other DBs
NCBI-ProteinID:
KAJ7972784
UniProt:
A0AAD7Q0T7
LinkDB
All DBs
Position
4
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AA seq
412 aa
AA seq
DB search
MDLLKQELLNKRQALTEETGGRRVFKRSDLEKKRIQKLRELEQRELEAKAKRHTGSSSAS
TTTTTSSTSNSITTTAAASTATASKSLTDEQNIDNLVLPKQEVIRRLRFLKQPITLFGED
DDARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIVELRKRQKTGMLSERKRQKMEDGVV
EDGEGGVGNDDLSLDGWSSGVDADKDLKRMKANFEELCDEDKILVFFKKLLNEWHQELNE
TPETEKRTAKGKSMVATFKQCARYLKPLFKFCRKKVLPDDIRQALMLVVDCCMKRDYLAA
MDHYIRMAIGNSPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFC
QRRYPTMPSKAVEFNSLANGSDLQSLLAEEKVLGGNPASEDRLRLMPAPRES
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacctcctgaagcaagagctcctcaacaagcgccaagccctgactgaagaaaccggt
gggaggagagtcttcaagcgctccgacctcgaaaagaaacgaatccaaaagctccgcgag
ctagaacaacgtgaattagaagccaaagctaagcgacataccggttcttcctccgccagc
acaaccacaacaacttcctctaccagtaactcgattaccaccacagccgccgcctccact
gctaccgcttccaaatccctaacagacgagcaaaacatcgacaaccttgttcttcccaaa
caagaagtcattcgccgcctccgattcctaaaacaacccatcactctatttggtgaagac
gatgatgcgcggctcgacaggttgaagtacgtattgaaagcaggtttatttgaagttgat
agtgatatgaccgaggggcagaccaatgattttctacgtgatattgtggagttgaggaag
cggcagaagacggggatgttgagcgagaggaaacggcaaaagatggaggatggggtggtg
gaggatggagaaggaggtgtagggaatgatgacttgagcttagatggttggtcgagtggg
gttgatgctgataaggatttgaaaagaatgaaggcgaattttgaggagttatgtgatgag
gataaaattcttgtctttttcaaaaagctgttgaatgagtggcatcaggagttgaacgag
acaccggagacggagaagcgaacagctaaagggaaatctatggttgccacgtttaagcag
tgtgctagatacttgaaaccgcttttcaaattttgcaggaaaaaggttcttccggatgat
attcgccaggcactgatgctggtagttgactgctgcatgaagcgagattacttggctgca
atggaccactatatcagaatggccatcgggaactcaccgtggcctattggtgtcactatg
gttggtattcatgagagatctgcccgtgaaaagatttataccaatagtgtagcccacatc
atgaatgatgagacaacccgaaagtatttacaatcagtgaagagattaatgacgttttgc
caacgacgttacccaacaatgccatcaaaagcagtggagtttaacagcttggcaaatggt
agtgacttgcagtcattactagcagaagaaaaggttttggggggtaatccagcctcagaa
gacaggcttagactaatgcctgcaccgagagagagctag
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